RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 FAM186AA6NE01 2351 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 COL4A6Q14031 1691 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 KMT2EQ8IZD2 1858 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 CACNA1FO60840 1977 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SOWAHBA6NEL2 793 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 APAF1O14727 1248 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 CD4P01730 458 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 NBPF7P0C2Y1 421 aaPredicted RBP12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 AKR1A1P14550 325 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 MECOMQ03112 1051 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SPATC1LQ9H0A9 340 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 WNT8AQ9H1J5 351 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ALG13Q9NP73 1137 aaKnown RBP12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SLC5A4Q9NY91 659 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ZNF536O15090 1300 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ELP1O95163 1332 aa12□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 MED19A0JLT2 244 aaPredicted RBP11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 TLR3O15455 904 aaKnown RBP11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PGK2P07205 417 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ASGR1P07306 291 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ZP2Q05996 745 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SLF2Q8IX21 1173 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SCLYQ96I15 445 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 GNL3LQ9NVN8 582 aaKnown RBP11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PI4KBQ9UBF8 816 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 NRBP1Q9UHY1 535 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 MUTYHQ9UIF7 546 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ROBO3Q96MS0 1386 aa11.99□□□□□ -0.49
IGKV2D-28-202ENST00000558026 H3BQ06 376 aaPredicted RBP11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 GH2P01242 217 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 IRS1P35568 1242 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ID4P47928 161 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PLS1Q14651 629 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 WDR43Q15061 677 aaKnown RBP eCLIP11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 NCAPG2Q86XI2 1143 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 TEX11Q8IYF3 940 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ZGPATQ8N5A5 531 aaKnown RBP11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 TINF2Q9BSI4 451 aa11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
IGKV2D-28-202ENST00000558026 C6orf222P0C671 652 aaPredicted RBP11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ADORA1P30542 326 aa11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 RASGRF1Q13972 1273 aa11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ATP2B3Q16720 1220 aa11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SLC4A10Q6U841 1118 aa11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 CRACR2BQ8N4Y2 399 aaPredicted RBP11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SHCBP1Q8NEM2 672 aa11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SH3RF3Q8TEJ3 882 aaPredicted RBP11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 TPRP12270 2363 aaKnown RBP11.97□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PTPRSQ13332 1948 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 LCHNA4D1U4 455 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 SEMA3EO15041 775 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ADCY6O43306 1168 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 DEFB128Q7Z7B8 93 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ATOH1Q92858 354 aaPredicted RBP11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PBXIP1Q96AQ6 731 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 MTUS1Q9ULD2 1270 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
IGKV2D-28-202ENST00000558026 MYO15AQ9UKN7 3530 aa11.96□□□□□ -0.5
IGKV2D-28-202ENST00000558026 EYA2O00167 538 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ALDH1L1O75891 902 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 FCER1AP12319 257 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CST5P28325 142 aaPredicted RBP11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CCDC102BQ68D86 513 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ATG9AQ7Z3C6 839 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 MAPKAPK5Q8IW41 473 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 KIAA1683Q9H0B3 1180 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 MROH8Q9H579 483 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 GINM1Q9NU53 330 aa11.95□□□□□ -0.5
IGKV2D-28-202ENST00000558026 NCOR2Q9Y618 2525 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 COG2Q14746 738 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 HERC4Q5GLZ8 1057 aaPredicted RBP11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 GNASQ5JWF2 1037 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SPTY2D1Q68D10 685 aaPredicted RBP11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 BMP8AQ7Z5Y6 402 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PCSK9Q8NBP7 692 aaKnown RBP11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 NEK9Q8TD19 979 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 AGBL1Q96MI9 1066 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CNTNAP3BQ96NU0 1288 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PRRX2Q99811 253 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CNTNAP3Q9BZ76 1288 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 LMCD1Q9NZU5 365 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms