RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 LACTBP83111 547 aaPredicted RBP19.66■□□□□ 0.74
PBX4-202ENST00000557978 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 MTA3Q9BTC8 594 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 KAT14Q9H8E8 782 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 MORF4L1Q9UBU8 362 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 RABGAP1Q9Y3P9 1069 aa19.66■□□□□ 0.74
PBX4-202ENST00000557978 SPDYE16A6NNV3 312 aaPredicted RBP19.65■□□□□ 0.74
PBX4-202ENST00000557978 MCCP23508 829 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 MCM5P33992 734 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
PBX4-202ENST00000557978 MB21D2Q8IYB1 491 aaPredicted RBP19.65■□□□□ 0.74
PBX4-202ENST00000557978 MB21D1Q8N884 522 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 ENAHQ8N8S7 591 aaPredicted RBP19.65■□□□□ 0.74
PBX4-202ENST00000557978 GPRC5AQ8NFJ5 357 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 CD99L2Q8TCZ2 262 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 DCAF4Q8WV16 495 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 NUP88Q99567 741 aaPredicted RBP19.65■□□□□ 0.74
PBX4-202ENST00000557978 FEM1BQ9UK73 627 aa19.65■□□□□ 0.74
PBX4-202ENST00000557978 IFIT3O14879 490 aaKnown RBP19.64■□□□□ 0.73
PBX4-202ENST00000557978 GNRH1P01148 92 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 CTU1Q7Z7A3 348 aaKnown RBP19.64■□□□□ 0.73
PBX4-202ENST00000557978 PRPF38AQ8NAV1 312 aaKnown RBP19.64■□□□□ 0.73
PBX4-202ENST00000557978 PNMA1Q8ND90 353 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 CHURC1Q8WUH1 139 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 NEK1Q96PY6 1258 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 PAGR1Q9BTK6 254 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 RBPJLQ9UBG7 517 aa19.64■□□□□ 0.73
PBX4-202ENST00000557978 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
PBX4-202ENST00000557978 STAT2P52630 851 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 ERVK-9P63128 1117 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 ERVK-24P63145 666 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 SEC23AQ15436 765 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 KCNB2Q92953 911 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 SLF1Q9BQI6 1058 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 EFCC1Q9HA90 598 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 PPP1R9AQ9ULJ8 1098 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 MTMR7Q9Y216 660 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 PLXNB2O15031 1838 aa19.63■□□□□ 0.73
PBX4-202ENST00000557978 TMEM232C9JQI7 657 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 PLA2G6O60733 806 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
PBX4-202ENST00000557978 PSMC4P43686 418 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 CCNA1P78396 465 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 WTAPQ15007 396 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
PBX4-202ENST00000557978 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 CCAR1Q8IX12 1150 aaKnown RBP19.62■□□□□ 0.73
PBX4-202ENST00000557978 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 TMEM87BQ96K49 555 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 FBXO28Q9NVF7 368 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 ADAMTS5Q9UNA0 930 aa19.62■□□□□ 0.73
PBX4-202ENST00000557978 PRC1O43663 620 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 FMNL1O95466 1100 aaPredicted RBP19.61■□□□□ 0.73
PBX4-202ENST00000557978 FDX1P10109 184 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 HOXD10P28358 340 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 FCGRTP55899 365 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 IKQ13123 557 aaPredicted RBP19.61■□□□□ 0.73
PBX4-202ENST00000557978 PKN2Q16513 984 aaKnown RBP19.61■□□□□ 0.73
PBX4-202ENST00000557978 CHST3Q7LGC8 479 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 TMTC2Q8N394 836 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 ATG4CQ96DT6 458 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 TXNRD2Q9NNW7 524 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 TRIM17Q9Y577 477 aa19.61■□□□□ 0.73
PBX4-202ENST00000557978 SMCHD1A6NHR9 2005 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 SNHG28P0DPA3 235 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 PDHBP11177 359 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 ANTXR2P58335 489 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 CCDC96Q2M329 555 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 TMEM67Q5HYA8 995 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 GPATCH4Q5T3I0 446 aaKnown RBP19.6■□□□□ 0.73
PBX4-202ENST00000557978 COL13A1Q5TAT6 717 aaPredicted RBP19.6■□□□□ 0.73
PBX4-202ENST00000557978 KCTD1Q719H9 257 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 CTDP1Q9Y5B0 961 aaPredicted RBP19.6■□□□□ 0.73
PBX4-202ENST00000557978 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 BAZ2BQ9UIF8 2168 aaKnown RBP19.6■□□□□ 0.73
PBX4-202ENST00000557978 WDR19Q8NEZ3 1342 aa19.6■□□□□ 0.73
PBX4-202ENST00000557978 VWA5AO00534 786 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 PSMA5P28066 241 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 Q3C1V9 767 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 DHX32Q7L7V1 743 aaKnown RBP19.59■□□□□ 0.73
PBX4-202ENST00000557978 OTOP1Q7RTM1 612 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 IGDCC4Q8TDY8 1250 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 KIFC2Q96AC6 838 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 CHMP4CQ96CF2 233 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 BTBD7Q9P203 1132 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 TNPO2O14787 897 aaKnown RBP19.59■□□□□ 0.73
PBX4-202ENST00000557978 ZBED4O75132 1171 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 CNMDO75829 334 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 MAPK4P31152 587 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 PRMT2P55345 433 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 ZNF543Q08ER8 600 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 POTEEQ6S8J3 1075 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 COA7Q96BR5 231 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 ARHGAP39Q9C0H5 1083 aa19.59■□□□□ 0.73
PBX4-202ENST00000557978 PLXNA1Q9UIW2 1896 aa19.58■□□□□ 0.72
PBX4-202ENST00000557978 ECM2O94769 699 aaPredicted RBP19.58■□□□□ 0.72
PBX4-202ENST00000557978 LIFRP42702 1097 aa19.58■□□□□ 0.72
PBX4-202ENST00000557978 PLS1Q14651 629 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms