RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NEMP1O14524 444 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 SIN3BO75182 1162 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 APBA3O96018 575 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 BMP1P13497 986 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 TRIM27P14373 513 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 BPIP17213 487 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 PIP4K2BP78356 416 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 IRX6P78412 446 aaPredicted RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 FAPQ12884 760 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 SLC6A19Q695T7 634 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 CDCA2Q69YH5 1023 aaPredicted RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 GDF6Q6KF10 455 aaPredicted RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 MCATQ8IVS2 390 aaKnown RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 PAF1Q8N7H5 531 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 COG1Q8WTW3 980 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 KCTD13Q8WZ19 329 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 WNT8BQ93098 351 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 RNF166Q96A37 237 aaPredicted RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 WNK4Q96J92 1243 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.83□□□□□ -1.64
TDP1-217ENST00000557782 OSGEPQ9NPF4 335 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 ATG3Q9NT62 314 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 WHRNQ9P202 907 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 APEX2Q9UBZ4 518 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 RCAN3Q9UKA8 241 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 HCN2Q9UL51 889 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 INTUQ9ULD6 942 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 PNMA8BQ9ULN7 279 aaPredicted RBP4.83□□□□□ -1.64
TDP1-217ENST00000557782 SLC6A14Q9UN76 642 aa4.83□□□□□ -1.64
TDP1-217ENST00000557782 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.82□□□□□ -1.64
TDP1-217ENST00000557782 C9IYK1 514 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 ZNF862O60290 1169 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 MAN1A2O60476 641 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 NAT1P18440 290 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 LIG1P18858 919 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 MAOBP27338 520 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 GRIA2P42262 883 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 IL2P60568 153 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 GRB10Q13322 594 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 DBN1Q16643 649 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 KIF4BQ2VIQ3 1234 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 FOXD4L6Q3SYB3 417 aaPredicted RBP4.82□□□□□ -1.64
TDP1-217ENST00000557782 PIK3R6Q5UE93 754 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 ZNF468Q5VIY5 522 aaPredicted RBP4.82□□□□□ -1.64
TDP1-217ENST00000557782 FOXD4L3Q6VB84 417 aaPredicted RBP4.82□□□□□ -1.64
TDP1-217ENST00000557782 C12orf40Q86WS4 652 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 KIF18BQ86Y91 864 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 TMEM192Q8IY95 271 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 TTC9Q92623 222 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 TNFRSF25Q93038 417 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 TMEM87BQ96K49 555 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 ZNF512BQ96KM6 892 aaPredicted RBP4.82□□□□□ -1.64
TDP1-217ENST00000557782 LPIN3Q9BQK8 851 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 SARGQ9BW04 601 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 AKT3Q9Y243 479 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 CSADQ9Y600 493 aa4.82□□□□□ -1.64
TDP1-217ENST00000557782 SLC35F4A4IF30 521 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ERC2O15083 957 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 CBFA2T2O43439 604 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ECEL1O95672 775 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 FGAP02671 866 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 MYBL2P10244 700 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ITGA4P13612 1032 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 PHKG2P15735 406 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 CD53P19397 219 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 CDC25BP30305 580 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 PDE6BP35913 854 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ID4P47928 161 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 MAP4K2Q12851 820 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ABCB5Q2M3G0 1257 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 DCAF15Q66K64 600 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
TDP1-217ENST00000557782 TRIM46Q7Z4K8 759 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 DDX53Q86TM3 631 aaKnown RBP4.81□□□□□ -1.64
TDP1-217ENST00000557782 TRIM59Q8IWR1 403 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 MRPL41Q8IXM3 137 aaKnown RBP4.81□□□□□ -1.64
TDP1-217ENST00000557782 SPICE1Q8N0Z3 855 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 PJA1Q8NG27 643 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 CLIP3Q96DZ5 547 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 SCLYQ96I15 445 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 MRGPRX3Q96LB0 322 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 CCDC140Q96MF4 163 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ZFP42Q96MM3 310 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 SENP7Q9BQF6 1050 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ORAI3Q9BRQ5 295 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 SLC13A1Q9BZW2 595 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 MKRN2Q9H000 416 aaKnown RBP4.81□□□□□ -1.64
TDP1-217ENST00000557782 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 CRTAC1Q9NQ79 661 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 LRRC4BQ9NT99 713 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 TJP2Q9UDY2 1190 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 TAGLN3Q9UI15 199 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ANAPC4Q9UJX5 808 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 ANKRD6Q9Y2G4 727 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 HIF3AQ9Y2N7 669 aa4.81□□□□□ -1.64
TDP1-217ENST00000557782 GIT1Q9Y2X7 761 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms