RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
LINC00648-204ENST00000557749 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 PRKCSHP14314 528 aaPredicted RBP13.66□□□□□ -0.22
LINC00648-204ENST00000557749 GRK4P32298 578 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 SHMT1P34896 483 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 CCNA1P78396 465 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 USP17L24Q0WX57 530 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 IRF5Q13568 498 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 SLC4A8Q2Y0W8 1093 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
LINC00648-204ENST00000557749 ANKRD13CQ8N6S4 541 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 LPAR1Q92633 364 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.66□□□□□ -0.22
LINC00648-204ENST00000557749 MORF4L1Q9UBU8 362 aa13.66□□□□□ -0.22
LINC00648-204ENST00000557749 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
LINC00648-204ENST00000557749 HERVK_113P62684 666 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 C12orf60Q5U649 245 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 METTL3Q86U44 580 aaKnown RBP13.65□□□□□ -0.22
LINC00648-204ENST00000557749 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 SOCS4Q8WXH5 440 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
LINC00648-204ENST00000557749 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 USP17L21D6R901 530 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 MAPK4P31152 587 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 SBK1Q52WX2 424 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 C16orf86Q6ZW13 317 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 TRMT44Q8IYL2 757 aaKnown RBP13.64□□□□□ -0.23
LINC00648-204ENST00000557749 EVI5LQ96CN4 794 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
LINC00648-204ENST00000557749 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
LINC00648-204ENST00000557749 BIN2Q9UBW5 565 aaPredicted RBP13.64□□□□□ -0.23
LINC00648-204ENST00000557749 MYH8P13535 1937 aa13.64□□□□□ -0.23
LINC00648-204ENST00000557749 MGAMO43451 1857 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 GPAA1O43292 621 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 TDO2P48775 406 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 PRKCZQ05513 592 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 LBX2Q6XYB7 198 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 LAPTM4BQ86VI4 370 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 PI4K2BQ8TCG2 481 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
LINC00648-204ENST00000557749 STAP2Q9UGK3 403 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
LINC00648-204ENST00000557749 ROBO3Q96MS0 1386 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 KIAA0100Q14667 2235 aaKnown RBP13.62□□□□□ -0.23
LINC00648-204ENST00000557749 PRKAB2O43741 272 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 APPP05067 770 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 VCAM1P19320 739 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 CDK8P49336 464 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 FLT3LGP49771 235 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 ICA1Q05084 483 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 SEPT2Q15019 361 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 MB21D1Q8N884 522 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 GOPCQ9HD26 462 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 HOXC10Q9NYD6 342 aa13.62□□□□□ -0.23
LINC00648-204ENST00000557749 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
LINC00648-204ENST00000557749 ADCY3O60266 1144 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 ERVK-24P63145 666 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 JAG1P78504 1218 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 PDE4BQ07343 736 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 CTR9Q6PD62 1173 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 CATSPERGQ6ZRH7 1159 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 SMC5Q8IY18 1101 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 SH3TC2Q8TF17 1288 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 NLRP7Q8WX94 980 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 ZFRQ96KR1 1074 aaKnown RBP13.61□□□□□ -0.23
LINC00648-204ENST00000557749 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
LINC00648-204ENST00000557749 SYNPO2Q9UMS6 1093 aa13.61□□□□□ -0.23
LINC00648-204ENST00000557749 GSG1L2A8MUP6 293 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 CTGFP29279 349 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 PDE1AP54750 535 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
LINC00648-204ENST00000557749 CAP1Q01518 475 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 COG2Q14746 738 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 ZYXQ15942 572 aaKnown RBP13.6□□□□□ -0.23
LINC00648-204ENST00000557749 PDE4DIPQ5VU43 2346 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 TSHZ3Q63HK5 1081 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 OSBP2Q969R2 916 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 NAPBQ9H115 298 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 RPAP3Q9H6T3 665 aaPredicted RBP13.6□□□□□ -0.23
LINC00648-204ENST00000557749 TMX2Q9Y320 296 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
LINC00648-204ENST00000557749 SALL3Q9BXA9 1300 aa13.6□□□□□ -0.23
LINC00648-204ENST00000557749 RCCD1A6NED2 376 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 WDR46O15213 610 aaKnown RBP13.59□□□□□ -0.23
LINC00648-204ENST00000557749 HMGCRP04035 888 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 OATP04181 439 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 GJB1P08034 283 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 CYP2D6P10635 497 aa13.59□□□□□ -0.23
LINC00648-204ENST00000557749 XRCC5P13010 732 aaKnown RBP13.59□□□□□ -0.23
LINC00648-204ENST00000557749 ZMYM1Q5SVZ6 1142 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms