RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
SUPT16H-208ENST00000557652 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 SLC1A4P43007 532 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 GCLCP48506 637 aaPredicted RBP16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 ASPRV1Q53RT3 343 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 FAM160B2Q86V87 743 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
SUPT16H-208ENST00000557652 PDHXO00330 501 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 IGF2BP3O00425 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 BMP3P12645 472 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 EVCP57679 992 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 COG2Q14746 738 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 RABEP1Q15276 862 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 MB21D1Q8N884 522 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 PTPN18Q99952 460 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 ZFYVE28Q9HCC9 887 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 PNMA2Q9UL42 364 aa16.5■□□□□ 0.23
SUPT16H-208ENST00000557652 A0A0G2JMZ2 1700 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 PDHBP11177 359 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 KIF5BP33176 963 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 GNAQP50148 359 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 TAF1CQ15572 869 aaPredicted RBP16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 BTNL9Q6UXG8 535 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 ZIC5Q96T25 663 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 LZTS2Q9BRK4 669 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
SUPT16H-208ENST00000557652 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 STAT2P52630 851 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 TROAPQ12815 778 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 Q6ZUG5 572 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 CHST3Q7LGC8 479 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 PRPF38AQ8NAV1 312 aaKnown RBP16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 ASCC2Q9H1I8 757 aaPredicted RBP16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 WBP1LQ9NX94 342 aa16.48■□□□□ 0.23
SUPT16H-208ENST00000557652 CCDC196A0A1B0GTZ2 297 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 TLR2O60603 784 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 SMCR8Q8TEV9 937 aaPredicted RBP16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 PPP1R9AQ9ULJ8 1098 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 NID2Q14112 1375 aa16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
SUPT16H-208ENST00000557652 RAD21O60216 631 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 FLOT1O75955 427 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 DSG3P32926 999 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 GRM4Q14833 912 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 ZNF274Q96GC6 653 aaPredicted RBP16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 RNF186Q9NXI6 227 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
SUPT16H-208ENST00000557652 PALM3A6NDB9 673 aaPredicted RBP16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 ZBTB43O43298 467 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 ST18O60284 1047 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 COPB2P35606 906 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 MCM2P49736 904 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 NEK4P51957 841 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 OAZ1P54368 228 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 HERVK_113P62684 666 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 TRAF1Q13077 416 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 FAM110CQ1W6H9 321 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 BRF1Q92994 677 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 KIF2CQ99661 725 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 MGAMO43451 1857 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
SUPT16H-208ENST00000557652 SPDYE16A6NNV3 312 aaPredicted RBP16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 ATP2A1O14983 1001 aa16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 LRRC2Q9BYS8 371 aa16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 MORF4L1Q9UBU8 362 aa16.44■□□□□ 0.22
SUPT16H-208ENST00000557652 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
SUPT16H-208ENST00000557652 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms