RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CTNND1O60716 968 aaKnown RBP11.88□□□□□ -0.51
GABRB3-212ENST00000557641 F13A1P00488 732 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 GH2P01242 217 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
GABRB3-212ENST00000557641 SNHG28P0DPA3 235 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 PTMSP20962 102 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 EPHX2P34913 555 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 TRIM29Q14134 588 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 SEPT2Q15019 361 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
GABRB3-212ENST00000557641 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 SLC26A6Q9BXS9 759 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 ZSCAN16Q9H4T2 348 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-212ENST00000557641 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 ZBTB21Q9ULJ3 1066 aa11.88□□□□□ -0.51
GABRB3-212ENST00000557641 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-212ENST00000557641 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-212ENST00000557641 PHF20L1A8MW92 1017 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 GDF11O95390 407 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
GABRB3-212ENST00000557641 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 FUT2Q10981 343 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 PKP1Q13835 747 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 MIGA2Q7L4E1 593 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 PHKBQ93100 1093 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 ZNF112Q9UJU3 913 aa11.87□□□□□ -0.51
GABRB3-212ENST00000557641 SIPA1L1O43166 1804 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 PDHBP11177 359 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 NBPF12Q5TAG4 269 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-212ENST00000557641 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 SRBD1Q8N5C6 995 aaKnown RBP11.86□□□□□ -0.51
GABRB3-212ENST00000557641 GMCL1Q96IK5 515 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 TAF1DQ9H5J8 278 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-212ENST00000557641 TMX2Q9Y320 296 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 CNTNAP5Q8WYK1 1306 aa11.86□□□□□ -0.51
GABRB3-212ENST00000557641 hCG_1984214I3L0E3 225 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 PLEKHA8P1O95397 391 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 SLURP2P0DP57 97 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 NF2P35240 595 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
GABRB3-212ENST00000557641 ATL3Q6DD88 541 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 SIAH1Q8IUQ4 282 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 CDAN1Q8IWY9 1227 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 ZNF713Q8N859 430 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-212ENST00000557641 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 SH3GLB2Q9NR46 395 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
GABRB3-212ENST00000557641 V9GY48 417 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-212ENST00000557641 GREB1LQ9C091 1923 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-212ENST00000557641 DDX11L8A8MPP1 907 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 F5H6K3 240 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
GABRB3-212ENST00000557641 MCM4P33991 863 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 SLC1A4P43007 532 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 JAG1P78504 1218 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 KLRC3Q07444 240 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 SAFBQ15424 915 aaKnown RBP eCLIP11.84□□□□□ -0.51
GABRB3-212ENST00000557641 NFKBIBQ15653 356 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
GABRB3-212ENST00000557641 SLFN13Q68D06 897 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 LRRC47Q8N1G4 583 aaKnown RBP11.84□□□□□ -0.51
GABRB3-212ENST00000557641 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
GABRB3-212ENST00000557641 RIOX1Q9H6W3 641 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 AS3MTQ9HBK9 375 aa11.84□□□□□ -0.51
GABRB3-212ENST00000557641 PPP1R12BO60237 982 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-212ENST00000557641 SCG2P13521 617 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-212ENST00000557641 PKN1Q16512 942 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 CCDC96Q2M329 555 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 NOL9Q5SY16 702 aaKnown RBP11.83□□□□□ -0.52
GABRB3-212ENST00000557641 KRT40Q6A162 431 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
GABRB3-212ENST00000557641 CCDC12Q8WUD4 166 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-212ENST00000557641 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 WDR18Q9BV38 432 aa11.83□□□□□ -0.52
GABRB3-212ENST00000557641 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
GABRB3-212ENST00000557641 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms