RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 TRIM43BA6NCK2 446 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 GPR37L1O60883 481 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 ENTPD3O75355 529 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 ADH1BP00325 375 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 IGFBP4P22692 258 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 DEKP35659 375 aaKnown RBP8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 GGCXP38435 758 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 RGS3P49796 1198 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 SPP2Q13103 211 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 GJC2Q5T442 439 aaPredicted RBP8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 GPR142Q7Z601 462 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 SH3RF1Q7Z6J0 888 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 ZFPM1Q8IX07 1006 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 ZNF280CQ8ND82 737 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 WDR66Q8TBY9 1149 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 DNAAF4Q8WXU2 420 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 TSC1Q92574 1164 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 TRIM43Q96BQ3 446 aaPredicted RBP8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 UTYO14607 1347 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 MROH5Q6ZUA9 1318 aa8.47□□□□□ -1.05
SPTLC2-206ENST00000557566 MYH2Q9UKX2 1941 aa8.46□□□□□ -1.05
SPTLC2-206ENST00000557566 EPHB4P54760 987 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 FPGSQ05932 587 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 C1orf53Q5VUE5 145 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 CCDC129Q6ZRS4 1044 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 G2E3Q7L622 706 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 PLEKHH3Q7Z736 793 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 IDI2Q9BXS1 227 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 TACC3Q9Y6A5 838 aa8.46□□□□□ -1.06
SPTLC2-206ENST00000557566 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 S1PR4O95977 384 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 CLTBP09497 229 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 RAG1P15918 1043 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 ITGB8P26012 769 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 HERVK_113P62684 666 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 ERVK-9P63128 1117 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 ERVK-24P63145 666 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 FKBP5Q13451 457 aaPredicted RBP8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 ADGRE1Q14246 886 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 GTF3C2Q8WUA4 911 aaPredicted RBP8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 EDC3Q96F86 508 aaKnown RBP8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 PBX4Q9BYU1 374 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 OSBPL5Q9H0X9 879 aaPredicted RBP8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 PORCNQ9H237 461 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 TXNRD2Q9NNW7 524 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 LRRC37A2A6NM11 1700 aa8.45□□□□□ -1.06
SPTLC2-206ENST00000557566 DDTLA6NHG4 134 aaPredicted RBP8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 APBB1O00213 710 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 KIAA0355O15063 1070 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 PEX10O60683 326 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 AP1G2O75843 785 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 HOXA7P31268 230 aaPredicted RBP8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 KCNQ1P51787 676 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 TFF2Q03403 129 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 TLE2Q04725 743 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 METTL24Q5JXM2 366 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 TSPYL6Q8N831 410 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 USB1Q9BQ65 265 aaKnown RBP8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 PAGR1Q9BTK6 254 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 AS3MTQ9HBK9 375 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 TMOD4Q9NZQ9 345 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 FLRT1Q9NZU1 646 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 KIF16BQ96L93 1317 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 GBF1Q92538 1859 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 RFX7Q2KHR2 1363 aa8.44□□□□□ -1.06
SPTLC2-206ENST00000557566 FAM86C2PA6NEL3 165 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 CFAP99D6REC4 459 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 SMIM22K7EJ46 135 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 PDE8BO95263 885 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 LDHBP07195 334 aaKnown RBP8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 IFIT1P09914 478 aaKnown RBP8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 SLURP2P0DP57 97 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 CYBAP13498 195 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 PRDX5P30044 214 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 ANP32AP39687 249 aaKnown RBP8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 ADCYAP1R1P41586 468 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 CCNA1P78396 465 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 WDR43Q15061 677 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 RAB30Q15771 203 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 FERMT2Q96AC1 680 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 RBPJLQ9UBG7 517 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 MSRAQ9UJ68 235 aa8.43□□□□□ -1.06
SPTLC2-206ENST00000557566 CFAP54Q96N23 3096 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms