RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 CLUAP1Q96AJ1 413 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 MMP19Q99542 508 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 MCM9Q9NXL9 1143 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 NOP58Q9Y2X3 529 aaKnown RBP14.79□□□□□ -0.04
RTN1-208ENST00000557422 MAGEB6P1A0A0J9YX57 407 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 ADAMTS4O75173 837 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 TIMP1P01033 207 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 ZNF865P0CJ78 1059 aaPredicted RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 ACLYP53396 1101 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 ZNF792Q3KQV3 632 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 TMEM179Q6ZVK1 233 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 ATXN2LQ8WWM7 1075 aaKnown RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 PPM1EQ8WY54 764 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 FRAT1Q92837 279 aaPredicted RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 LENG1Q96BZ8 264 aaPredicted RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.78□□□□□ -0.04
RTN1-208ENST00000557422 TSEN34Q9BSV6 310 aaKnown RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 CRNKL1Q9BZJ0 848 aaKnown RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 DIS3Q9Y2L1 958 aaKnown RBP14.78□□□□□ -0.04
RTN1-208ENST00000557422 TMX2Q9Y320 296 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 BDP1A6H8Y1 2624 aa14.78□□□□□ -0.04
RTN1-208ENST00000557422 ROBO3Q96MS0 1386 aa14.77□□□□□ -0.04
RTN1-208ENST00000557422 AKR1A1P14550 325 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 PBX2P40425 430 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 AKNAD1Q5T1N1 836 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 C16orf59Q7L2K0 433 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 ASB2Q96Q27 587 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 GAS2L1Q99501 681 aaPredicted RBP14.77□□□□□ -0.05
RTN1-208ENST00000557422 VCPKMTQ9H867 229 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 STARD7Q9NQZ5 370 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 TBX21Q9UL17 535 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 ADAMTS5Q9UNA0 930 aa14.77□□□□□ -0.05
RTN1-208ENST00000557422 NAV1Q8NEY1 1877 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 GRXCR1A8MXD5 290 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 WDR46O15213 610 aaKnown RBP14.76□□□□□ -0.05
RTN1-208ENST00000557422 CYP2D6P10635 497 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 KCTD2Q14681 263 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 TMEM240Q5SV17 173 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 RASIP1Q5U651 963 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 MFSD5Q6N075 450 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 KLHDC9Q8NEP7 349 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 PBX4Q9BYU1 374 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 PRDM12Q9H4Q4 367 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 ARHGEF10LQ9HCE6 1279 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 FBXO28Q9NVF7 368 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 PLXNA1Q9UIW2 1896 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 COL11A1P12107 1806 aaPredicted RBP14.76□□□□□ -0.05
RTN1-208ENST00000557422 PARP14Q460N5 1801 aa14.76□□□□□ -0.05
RTN1-208ENST00000557422 SYNRGQ9UMZ2 1314 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 AKR1B1P15121 316 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 PDE6AP16499 860 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 STAT3P40763 770 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 ICA1Q05084 483 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 KCNA10Q16322 511 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 CCSAPQ6IQ19 270 aaPredicted RBP14.75□□□□□ -0.05
RTN1-208ENST00000557422 CCDC129Q6ZRS4 1044 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 ADAMTS19Q8TE59 1207 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 SDR42E1Q8WUS8 393 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 DYNLL2Q96FJ2 89 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 SH2D4AQ9H788 454 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 C1orf115Q9H7X2 142 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
RTN1-208ENST00000557422 THEGQ9P2T0 379 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 SWAP70Q9UH65 585 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 CNPY2Q9Y2B0 182 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 CHD9Q3L8U1 2897 aa14.75□□□□□ -0.05
RTN1-208ENST00000557422 MOXD2PA6NHM9 499 aa14.74□□□□□ -0.05
RTN1-208ENST00000557422 CDK7P50613 346 aa14.74□□□□□ -0.05
RTN1-208ENST00000557422 MRPS5P82675 430 aaKnown RBP14.74□□□□□ -0.05
RTN1-208ENST00000557422 PPIGQ13427 754 aaKnown RBP eCLIP14.74□□□□□ -0.05
RTN1-208ENST00000557422 ADGRE1Q14246 886 aa14.74□□□□□ -0.05
RTN1-208ENST00000557422 SLC9C2Q5TAH2 1124 aa14.74□□□□□ -0.05
RTN1-208ENST00000557422 CCDC174Q6PII3 467 aa14.74□□□□□ -0.05
RTN1-208ENST00000557422 FAM184BQ9ULE4 1060 aa14.74□□□□□ -0.05
RTN1-208ENST00000557422 ELP1O95163 1332 aa14.73□□□□□ -0.05
RTN1-208ENST00000557422 MYADML2A6NDP7 307 aa14.73□□□□□ -0.05
RTN1-208ENST00000557422 VWA5AO00534 786 aa14.73□□□□□ -0.05
RTN1-208ENST00000557422 SNAI1O95863 264 aaPredicted RBP14.73□□□□□ -0.05
RTN1-208ENST00000557422 CSF2RAP15509 400 aa14.73□□□□□ -0.05
RTN1-208ENST00000557422 CCDC85BQ15834 202 aaPredicted RBP14.73□□□□□ -0.05
RTN1-208ENST00000557422 DIEXFQ68CQ4 756 aaKnown RBP14.73□□□□□ -0.05
RTN1-208ENST00000557422 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
RTN1-208ENST00000557422 MSL3Q8N5Y2 521 aaKnown RBP14.73□□□□□ -0.05
RTN1-208ENST00000557422 UHRF1Q96T88 793 aaPredicted RBP14.73□□□□□ -0.05
RTN1-208ENST00000557422 ZNF214Q9UL59 606 aaPredicted RBP14.73□□□□□ -0.05
RTN1-208ENST00000557422 MROH7Q68CQ1 1323 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 ZNF532Q9HCE3 1301 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 TCRBV5S4A2TA0A5A2 114 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 ACRP10323 421 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 EEF2P13639 858 aaKnown RBP14.72□□□□□ -0.05
RTN1-208ENST00000557422 COPB2P35606 906 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 PLA2G5P39877 138 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
RTN1-208ENST00000557422 TTF1Q15361 905 aaPredicted RBP14.72□□□□□ -0.05
RTN1-208ENST00000557422 AACSQ86V21 672 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms