RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 STAT3P40763 770 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 ICA1Q05084 483 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 AACSQ86V21 672 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 TRIM43Q96BQ3 446 aaPredicted RBP12.33□□□□□ -0.44
RDH11-210ENST00000557331 MMP19Q99542 508 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
RDH11-210ENST00000557331 TTYH1Q9H313 450 aaPredicted RBP12.33□□□□□ -0.44
RDH11-210ENST00000557331 SPC25Q9HBM1 224 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 DCP1AQ9NPI6 582 aaPredicted RBP12.33□□□□□ -0.44
RDH11-210ENST00000557331 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 PDE6AP16499 860 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 CLASRPQ8N2M8 674 aaKnown RBP12.32□□□□□ -0.44
RDH11-210ENST00000557331 PCSK9Q8NBP7 692 aaKnown RBP12.32□□□□□ -0.44
RDH11-210ENST00000557331 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 ELP1O95163 1332 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
RDH11-210ENST00000557331 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 A0A1W2PQ45 241 aaPredicted RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 A0A1W2PQY0 241 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 TIMP1P01033 207 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 MS4A1P11836 297 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 PPIGQ13427 754 aaKnown RBP eCLIP12.31□□□□□ -0.44
RDH11-210ENST00000557331 TMEM132BQ14DG7 1078 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 ZNF792Q3KQV3 632 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 ANO1Q5XXA6 986 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 ANTXR1Q9H6X2 564 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 STARD7Q9NQZ5 370 aa12.31□□□□□ -0.44
RDH11-210ENST00000557331 TLR7Q9NYK1 1049 aaKnown RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
RDH11-210ENST00000557331 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 VWA5AO00534 786 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 PQBP1O60828 265 aaKnown RBP12.3□□□□□ -0.44
RDH11-210ENST00000557331 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
RDH11-210ENST00000557331 HMMRO75330 724 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 DNAJB2P25686 324 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 KIF1BPQ96EK5 621 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
RDH11-210ENST00000557331 TEX13BQ9BXU2 312 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 ZNF576Q9H609 170 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 ZNF532Q9HCE3 1301 aa12.3□□□□□ -0.44
RDH11-210ENST00000557331 PGK1P00558 417 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
RDH11-210ENST00000557331 ZNF865P0CJ78 1059 aaPredicted RBP12.29□□□□□ -0.44
RDH11-210ENST00000557331 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
RDH11-210ENST00000557331 ACLYP53396 1101 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 ZSCAN25Q6NSZ9 544 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 PSRC1Q6PGN9 363 aaPredicted RBP12.29□□□□□ -0.44
RDH11-210ENST00000557331 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 TIFAQ96CG3 184 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 DDX11Q96FC9 970 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 CHMP4BQ9H444 224 aaKnown RBP12.29□□□□□ -0.44
RDH11-210ENST00000557331 FBXO40Q9UH90 709 aa12.29□□□□□ -0.44
RDH11-210ENST00000557331 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 TCRBV5S4A2TA0A5A2 114 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 TLR3O15455 904 aaKnown RBP12.28□□□□□ -0.44
RDH11-210ENST00000557331 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 ADAMTS4O75173 837 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 FDX1P10109 184 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 CDK8P49336 464 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 FAAP100Q0VG06 881 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 RAB30Q15771 203 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 CCDC129Q6ZRS4 1044 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 C16orf86Q6ZW13 317 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
RDH11-210ENST00000557331 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
RDH11-210ENST00000557331 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
RDH11-210ENST00000557331 KLHDC9Q8NEP7 349 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
RDH11-210ENST00000557331 ABHD16BQ9H3Z7 469 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
RDH11-210ENST00000557331 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
RDH11-210ENST00000557331 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms