RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 RNF4P78317 190 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 LCNL1Q6ZST4 164 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 SPPL2CQ8IUH8 684 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 ZSCAN18Q8TBC5 510 aaPredicted RBP7.03□□□□□ -1.28
KTN1-225ENST00000557267 LINC01599Q8WXQ3 324 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 RNF34Q969K3 372 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 EHMT1Q9H9B1 1298 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 PCDHGB7Q9Y5F8 929 aa7.03□□□□□ -1.28
KTN1-225ENST00000557267 ETV2O00321 342 aaPredicted RBP7.02□□□□□ -1.29
KTN1-225ENST00000557267 GLDCP23378 1020 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 VAMP1P23763 118 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 CLCQ05315 142 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 ATG14Q6ZNE5 492 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 SLITRK4Q8IW52 837 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 USHBP1Q8N6Y0 703 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 KCNN1Q92952 543 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
KTN1-225ENST00000557267 SLC26A8Q96RN1 970 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 CD320Q9NPF0 282 aa7.02□□□□□ -1.29
KTN1-225ENST00000557267 SCAMP3O14828 347 aaKnown RBP7.01□□□□□ -1.29
KTN1-225ENST00000557267 CHRNEQ04844 493 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 SNX17Q15036 470 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 CLEC16AQ2KHT3 1053 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
KTN1-225ENST00000557267 CDCP2Q5VXM1 449 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 NLRC3Q7RTR2 1065 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 AMIGO3Q86WK7 504 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 SYTL5Q8TDW5 730 aaPredicted RBP7.01□□□□□ -1.29
KTN1-225ENST00000557267 EAF1Q96JC9 268 aaPredicted RBP7.01□□□□□ -1.29
KTN1-225ENST00000557267 G6PC3Q9BUM1 346 aa7.01□□□□□ -1.29
KTN1-225ENST00000557267 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.01□□□□□ -1.292e-7■■□□□ 13.9
KTN1-225ENST00000557267 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
KTN1-225ENST00000557267 CWC22Q9HCG8 908 aaKnown RBP7.01□□□□□ -1.29
KTN1-225ENST00000557267 NPIPB6E9PJ23 425 aa7□□□□□ -1.29
KTN1-225ENST00000557267 ZSCAN22P10073 491 aaPredicted RBP7□□□□□ -1.29
KTN1-225ENST00000557267 POLR2BP30876 1174 aaKnown RBP7□□□□□ -1.29
KTN1-225ENST00000557267 NMIQ13287 307 aaPredicted RBP7□□□□□ -1.29
KTN1-225ENST00000557267 KCNA10Q16322 511 aa7□□□□□ -1.29
KTN1-225ENST00000557267 NBPF9Q3BBW0 867 aa7□□□□□ -1.29
KTN1-225ENST00000557267 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
KTN1-225ENST00000557267 IRF2BP1Q8IU81 584 aa7□□□□□ -1.29
KTN1-225ENST00000557267 ANKS4BQ8N8V4 417 aa7□□□□□ -1.29
KTN1-225ENST00000557267 SHISA4Q96DD7 197 aa7□□□□□ -1.29
KTN1-225ENST00000557267 ATG4CQ96DT6 458 aa7□□□□□ -1.29
KTN1-225ENST00000557267 HDAC8Q9BY41 377 aa7□□□□□ -1.29
KTN1-225ENST00000557267 SLC6A17Q9H1V8 727 aa7□□□□□ -1.29
KTN1-225ENST00000557267 CNNM2Q9H8M5 875 aa7□□□□□ -1.29
KTN1-225ENST00000557267 SMG5Q9UPR3 1016 aaKnown RBP7□□□□□ -1.29
KTN1-225ENST00000557267 YBX2Q9Y2T7 364 aaKnown RBP7□□□□□ -1.29
KTN1-225ENST00000557267 NOTOA8MTQ0 251 aa6.99□□□□□ -1.29
KTN1-225ENST00000557267 PSPNO60542 156 aa6.99□□□□□ -1.29
KTN1-225ENST00000557267 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
KTN1-225ENST00000557267 DUSP4Q13115 394 aa6.99□□□□□ -1.29
KTN1-225ENST00000557267 DAGLBQ8NCG7 672 aa6.99□□□□□ -1.29
KTN1-225ENST00000557267 MEIS3P2A8K0S8 358 aa6.98□□□□□ -1.29
KTN1-225ENST00000557267 CLEC3AO75596 197 aa6.98□□□□□ -1.29
KTN1-225ENST00000557267 RNF111Q6ZNA4 994 aa6.98□□□□□ -1.29
KTN1-225ENST00000557267 ZNF655Q8N720 491 aaPredicted RBP6.98□□□□□ -1.29
KTN1-225ENST00000557267 MRRFQ96E11 262 aaKnown RBP6.98□□□□□ -1.29
KTN1-225ENST00000557267 INTS4Q96HW7 963 aaKnown RBP6.98□□□□□ -1.29
KTN1-225ENST00000557267 FERD3LQ96RJ6 166 aa6.98□□□□□ -1.29
KTN1-225ENST00000557267 ANTXR1Q9H6X2 564 aa6.98□□□□□ -1.29
KTN1-225ENST00000557267 ZNF552Q9H707 407 aaPredicted RBP6.98□□□□□ -1.29
KTN1-225ENST00000557267 MYOCOSA0A1B0GUC4 107 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 TCAF2A6NFQ2 919 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 PEX10O60683 326 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 IMPDH2P12268 514 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 NME1P15531 152 aaKnown RBP6.97□□□□□ -1.29
KTN1-225ENST00000557267 CCNFP41002 786 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 TMC3Q7Z5M5 1100 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 TCTN2Q96GX1 697 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 DDX41Q9UJV9 622 aaKnown RBP6.97□□□□□ -1.29
KTN1-225ENST00000557267 ZNRF3Q9ULT6 936 aa6.97□□□□□ -1.29
KTN1-225ENST00000557267 EFEMP2O95967 443 aa6.96□□□□□ -1.3
KTN1-225ENST00000557267 RPL10P27635 214 aaKnown RBP6.96□□□□□ -1.3
KTN1-225ENST00000557267 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
KTN1-225ENST00000557267 SNW1Q13573 536 aaKnown RBP6.96□□□□□ -1.3
KTN1-225ENST00000557267 ZNF654Q8IZM8 581 aa6.96□□□□□ -1.3
KTN1-225ENST00000557267 LINC00116Q8NCU8 138 aa6.96□□□□□ -1.3
KTN1-225ENST00000557267 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
KTN1-225ENST00000557267 FOXP3Q9BZS1 431 aa6.96□□□□□ -1.3
KTN1-225ENST00000557267 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
KTN1-225ENST00000557267 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 TNFRSF10CO14798 259 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 DLG4P78352 724 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 NLRX1Q86UT6 975 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 ZNF512BQ96KM6 892 aaPredicted RBP6.95□□□□□ -1.3
KTN1-225ENST00000557267 MKRN2Q9H000 416 aaKnown RBP6.95□□□□□ -1.3
KTN1-225ENST00000557267 TCFL5Q9UL49 500 aa6.95□□□□□ -1.3
KTN1-225ENST00000557267 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
KTN1-225ENST00000557267 KIR2DL1P43626 348 aaPredicted RBP6.94□□□□□ -1.3
KTN1-225ENST00000557267 KIR2DL2P43627 348 aaPredicted RBP6.94□□□□□ -1.3
KTN1-225ENST00000557267 GALK1P51570 392 aa6.94□□□□□ -1.3
KTN1-225ENST00000557267 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
KTN1-225ENST00000557267 LINC00310P59036 64 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms