RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 DBNLQ9UJU6 430 aaKnown RBP11.7□□□□□ -0.54
RIPK3-205ENST00000557253 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
RIPK3-205ENST00000557253 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
RIPK3-205ENST00000557253 SMCHD1A6NHR9 2005 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 DCDC2CA8MYV0 355 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 TIMP1P01033 207 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 ZNF865P0CJ78 1059 aaPredicted RBP11.69□□□□□ -0.54
RIPK3-205ENST00000557253 ACRP10323 421 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 CYP2D6P10635 497 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 TRIM27P14373 513 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 IGFBP4P22692 258 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 GABPAQ06546 454 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 POLA2Q14181 598 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 C16orf59Q7L2K0 433 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 CERS3Q8IU89 383 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 MB21D1Q8N884 522 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
RIPK3-205ENST00000557253 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
RIPK3-205ENST00000557253 DYNLL2Q96FJ2 89 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 UHRF1Q96T88 793 aaPredicted RBP11.69□□□□□ -0.54
RIPK3-205ENST00000557253 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
RIPK3-205ENST00000557253 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 MCM9Q9NXL9 1143 aa11.69□□□□□ -0.54
RIPK3-205ENST00000557253 COL11A1P12107 1806 aaPredicted RBP11.69□□□□□ -0.54
RIPK3-205ENST00000557253 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 IGSF3O75054 1194 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 ADAMTS4O75173 837 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 AKR1A1P14550 325 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 PLA2G5P39877 138 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 ACLYP53396 1101 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
RIPK3-205ENST00000557253 MRPS5P82675 430 aaKnown RBP11.68□□□□□ -0.54
RIPK3-205ENST00000557253 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 ZNF792Q3KQV3 632 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 TMEM240Q5SV17 173 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 ANKRD33Q7Z3H0 272 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 EAF2Q96CJ1 260 aaPredicted RBP11.68□□□□□ -0.54
RIPK3-205ENST00000557253 FAM122AQ96E09 287 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 TOX2Q96NM4 488 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 FBXO28Q9NVF7 368 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
RIPK3-205ENST00000557253 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 SLC25A27O95847 323 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 AKR1B1P15121 316 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 CSF2RAP15509 400 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 ATP8B2P98198 1209 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 KCTD2Q14681 263 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 KCNA10Q16322 511 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 AKNAD1Q5T1N1 836 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 TMEM179Q6ZVK1 233 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 SSH3Q8TE77 659 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 NUP133Q8WUM0 1156 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 NECAB3Q96P71 396 aaPredicted RBP11.67□□□□□ -0.54
RIPK3-205ENST00000557253 TSEN34Q9BSV6 310 aaKnown RBP11.67□□□□□ -0.54
RIPK3-205ENST00000557253 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 TBX21Q9UL17 535 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 PARP14Q460N5 1801 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 XIRP2A4UGR9 3374 aa11.67□□□□□ -0.54
RIPK3-205ENST00000557253 CHD9Q3L8U1 2897 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 APBB1O00213 710 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 RAD21O60216 631 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 ICA1Q05084 483 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 PPIGQ13427 754 aaKnown RBP eCLIP11.66□□□□□ -0.54
RIPK3-205ENST00000557253 ZNF365Q70YC5 407 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 RIOX2Q8IUF8 465 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 TMEM57Q8N5G2 664 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 CRNKL1Q9BZJ0 848 aaKnown RBP11.66□□□□□ -0.54
RIPK3-205ENST00000557253 NKX2-4Q9H2Z4 354 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
RIPK3-205ENST00000557253 CNPY2Q9Y2B0 182 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 TMX2Q9Y320 296 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 REV3LO60673 3130 aa11.66□□□□□ -0.54
RIPK3-205ENST00000557253 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
RIPK3-205ENST00000557253 IPO8O15397 1037 aaKnown RBP11.65□□□□□ -0.54
RIPK3-205ENST00000557253 STAT3P40763 770 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 SLC4A3P48751 1232 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 CCSAPQ6IQ19 270 aaPredicted RBP11.65□□□□□ -0.54
RIPK3-205ENST00000557253 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 LCORLQ8N3X6 602 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.54
RIPK3-205ENST00000557253 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 FAM184BQ9ULE4 1060 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 ADAMTS5Q9UNA0 930 aa11.65□□□□□ -0.54
RIPK3-205ENST00000557253 DIS3Q9Y2L1 958 aaKnown RBP11.65□□□□□ -0.54
RIPK3-205ENST00000557253 MYH8P13535 1937 aa11.64□□□□□ -0.55
RIPK3-205ENST00000557253 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms