RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 XDHP47989 1333 aa17.32■□□□□ 0.36
TMEM55B-207ENST00000557041 TRIM49BA6NDI0 452 aa17.32■□□□□ 0.36
TMEM55B-207ENST00000557041 VSTM4Q8IW00 320 aa17.32■□□□□ 0.36
TMEM55B-207ENST00000557041 PPP2R2CQ9Y2T4 447 aa17.32■□□□□ 0.36
TMEM55B-207ENST00000557041 CASP14P31944 242 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 ZNF569Q5MCW4 686 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 DPP8Q6V1X1 898 aaPredicted RBP17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 CCDC148Q8NFR7 591 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 PIGSQ96S52 555 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 PHF20Q9BVI0 1012 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 CD209Q9NNX6 404 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 ERICH4A6NGS2 130 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 TRIM21P19474 475 aaKnown RBP17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 ETF1P62495 437 aaKnown RBP17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 TOGARAM2Q6ZUX3 1019 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 CGNQ9P2M7 1197 aaKnown RBP17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 ADAMTS3O15072 1205 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 KIF5CO60282 957 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 RBL2Q08999 1139 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 PAK1Q13153 545 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 TBC1D7Q9P0N9 293 aa17.31■□□□□ 0.36
TMEM55B-207ENST00000557041 CDK8P49336 464 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 C6orf50Q9HD87 102 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 ARGLU1Q9NWB6 273 aaPredicted RBP17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 GUCA1BQ9UMX6 200 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 KRT9P35527 623 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 PDE4DQ08499 809 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 DRC1Q96MC2 740 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 SRRTQ9BXP5 876 aaKnown RBP17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 COL18A1P39060 1754 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 ARHGAP6O43182 974 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 HPS3Q969F9 1004 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
TMEM55B-207ENST00000557041 C12orf60Q5U649 245 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 PRR5LQ6MZQ0 368 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 CEP95Q96GE4 821 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 ACTN4O43707 911 aaKnown RBP17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 CCDC175P0C221 793 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 CD44P16070 742 aaKnown RBP17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 PFKFB3Q16875 520 aaPredicted RBP17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 KIAA1328Q86T90 577 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 SEMA3EO15041 775 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 SPATA1Q5VX52 437 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 ENOX1Q8TC92 643 aaKnown RBP17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 GJA10Q969M2 543 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 TMEM60Q9H2L4 133 aa17.29■□□□□ 0.36
TMEM55B-207ENST00000557041 CNTNAP5Q8WYK1 1306 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 PSMA7O14818 248 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 RPN1P04843 607 aaKnown RBP17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 KCTD1Q719H9 257 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 DEF6Q9H4E7 631 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 TMEM260Q9NX78 707 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 SNAP25P60880 206 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 MORC3Q14149 939 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 PCDHA4Q9UN74 947 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
TMEM55B-207ENST00000557041 CABP7Q86V35 215 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 LRRN4CLQ8ND94 238 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 ERO1AQ96HE7 468 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 FAM205AQ6ZU69 1335 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 SLF2Q8IX21 1173 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 CSGALNACT2Q8N6G5 542 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 ACRBPQ8NEB7 543 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 CAGE1Q8TC20 777 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 QTRT2Q9H974 415 aaKnown RBP17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 SLC39A2Q9NP94 309 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.36
TMEM55B-207ENST00000557041 TBCKQ8TEA7 893 aa17.27■□□□□ 0.35
TMEM55B-207ENST00000557041 BPIFA3Q9BQP9 254 aa17.27■□□□□ 0.35
TMEM55B-207ENST00000557041 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.35
TMEM55B-207ENST00000557041 USP54Q70EL1 1684 aa17.27■□□□□ 0.35
TMEM55B-207ENST00000557041 GNA11P29992 359 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 UBE2SQ16763 222 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 REXO1Q8N1G1 1221 aaKnown RBP17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 RHOXF2BP0C7M4 288 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 ARID5AQ03989 594 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 KCNJ12Q14500 433 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 TYW1BQ6NUM6 668 aa17.26■□□□□ 0.35
TMEM55B-207ENST00000557041 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms