RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 ADD2P35612 726 aa19.03■□□□□ 0.64
RCCD1-207ENST00000556774 TMEM132BQ14DG7 1078 aa19.03■□□□□ 0.64
RCCD1-207ENST00000556774 SNX17Q15036 470 aa19.03■□□□□ 0.64
RCCD1-207ENST00000556774 SHHQ15465 462 aa19.03■□□□□ 0.64
RCCD1-207ENST00000556774 GREB1LQ9C091 1923 aaPredicted RBP19.03■□□□□ 0.64
RCCD1-207ENST00000556774 FCER1AP12319 257 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 CDK8P49336 464 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 SH3RF1Q7Z6J0 888 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.02■□□□□ 0.64
RCCD1-207ENST00000556774 BADQ92934 168 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 BOLA2Q9H3K6 86 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 ATP8A2Q9NTI2 1148 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 FBXO28Q9NVF7 368 aa19.02■□□□□ 0.64
RCCD1-207ENST00000556774 PGK2P07205 417 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 C12orf60Q5U649 245 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 C16orf86Q6ZW13 317 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 SIRT2Q8IXJ6 389 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 CCDC17Q96LX7 622 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 MMP19Q99542 508 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 COL25A1Q9BXS0 654 aaPredicted RBP19.01■□□□□ 0.63
RCCD1-207ENST00000556774 VCANP13611 3396 aa19.01■□□□□ 0.63
RCCD1-207ENST00000556774 TRIM43BA6NCK2 446 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 USP17L12C9JPN9 530 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 USP17L21D6R901 530 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 HMMRO75330 724 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 SLC25A27O95847 323 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 EEF2P13639 858 aaKnown RBP19■□□□□ 0.63
RCCD1-207ENST00000556774 AMOTL1Q8IY63 956 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 TRIM43Q96BQ3 446 aaPredicted RBP19■□□□□ 0.63
RCCD1-207ENST00000556774 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.632e-16■■■■□ 20.5
RCCD1-207ENST00000556774 XPNPEP3Q9NQH7 507 aa19■□□□□ 0.63
RCCD1-207ENST00000556774 RAD21O60216 631 aa18.99■□□□□ 0.63
RCCD1-207ENST00000556774 RARBP10826 455 aa18.99■□□□□ 0.63
RCCD1-207ENST00000556774 RIOX2Q8IUF8 465 aa18.99■□□□□ 0.63
RCCD1-207ENST00000556774 RPAP2Q8IXW5 612 aaPredicted RBP18.99■□□□□ 0.63
RCCD1-207ENST00000556774 LENG1Q96BZ8 264 aaPredicted RBP18.99■□□□□ 0.63
RCCD1-207ENST00000556774 PHF24Q9UPV7 400 aa18.99■□□□□ 0.63
RCCD1-207ENST00000556774 PRUNE2Q8WUY3 3088 aa18.99■□□□□ 0.63
RCCD1-207ENST00000556774 ZBED9Q6R2W3 1325 aa18.99■□□□□ 0.63
RCCD1-207ENST00000556774 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 ROBO3Q96MS0 1386 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 RAB11FIP3O75154 756 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 PGK1P00558 417 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 TAL1P17542 331 aaPredicted RBP18.98■□□□□ 0.63
RCCD1-207ENST00000556774 ATP5JP18859 108 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 TLE2Q04725 743 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 DDRGK1Q96HY6 314 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 CDX2Q99626 313 aaPredicted RBP18.98■□□□□ 0.63
RCCD1-207ENST00000556774 HAUS7Q99871 368 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 PPP1R9AQ9ULJ8 1098 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 ADAMTS5Q9UNA0 930 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 COG6Q9Y2V7 657 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 SLC4A4Q9Y6R1 1079 aa18.98■□□□□ 0.63
RCCD1-207ENST00000556774 VWA5AO00534 786 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 ITGB8P26012 769 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 KCTD2Q14681 263 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 ZNF792Q3KQV3 632 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 C1orf53Q5VUE5 145 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 TINF2Q9BSI4 451 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 KANSL2Q9H9L4 492 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 GOPCQ9HD26 462 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 NRBP1Q9UHY1 535 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 ZNF214Q9UL59 606 aaPredicted RBP18.97■□□□□ 0.63
RCCD1-207ENST00000556774 MCM3APO60318 1980 aa18.97■□□□□ 0.63
RCCD1-207ENST00000556774 STAT3P40763 770 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 UBE3CQ15386 1083 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 CTR9Q6PD62 1173 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 RNF180Q86T96 592 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 REPS2Q8NFH8 660 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 DDX19BQ9UMR2 479 aa18.96■□□□□ 0.63
RCCD1-207ENST00000556774 A0A1W2PQ45 241 aaPredicted RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 A0A1W2PQY0 241 aa18.95■□□□□ 0.62
RCCD1-207ENST00000556774 PQBP1O60828 265 aaKnown RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 CLTBP09497 229 aa18.95■□□□□ 0.62
RCCD1-207ENST00000556774 MS4A1P11836 297 aa18.95■□□□□ 0.62
RCCD1-207ENST00000556774 SMAD3P84022 425 aaKnown RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 MAFAQ8NHW3 353 aaPredicted RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 MYLIPQ8WY64 445 aa18.95■□□□□ 0.62
RCCD1-207ENST00000556774 NUP88Q99567 741 aaPredicted RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 PUS7LQ9H0K6 701 aaKnown RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 TTYH1Q9H313 450 aaPredicted RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 SEMA6BQ9H3T3 888 aa18.95■□□□□ 0.62
RCCD1-207ENST00000556774 SPTBN5Q9NRC6 3674 aaKnown RBP18.95■□□□□ 0.62
RCCD1-207ENST00000556774 ZNF865P0CJ78 1059 aaPredicted RBP18.94■□□□□ 0.62
RCCD1-207ENST00000556774 AKR1A1P14550 325 aa18.94■□□□□ 0.62
RCCD1-207ENST00000556774 EPHB4P54760 987 aa18.94■□□□□ 0.62
RCCD1-207ENST00000556774 MIER1Q8N108 512 aa18.94■□□□□ 0.62
RCCD1-207ENST00000556774 STK11IPQ8N1F8 1099 aa18.94■□□□□ 0.62
RCCD1-207ENST00000556774 RNPC3Q96LT9 517 aaKnown RBP18.94■□□□□ 0.62
RCCD1-207ENST00000556774 ARPP21Q9UBL0 812 aaPredicted RBP18.94■□□□□ 0.62
RCCD1-207ENST00000556774 DIS3Q9Y2L1 958 aaKnown RBP18.94■□□□□ 0.62
RCCD1-207ENST00000556774 TACC3Q9Y6A5 838 aa18.94■□□□□ 0.62
RCCD1-207ENST00000556774 COPB2P35606 906 aa18.93■□□□□ 0.62
RCCD1-207ENST00000556774 SLF1Q9BQI6 1058 aa18.93■□□□□ 0.62
RCCD1-207ENST00000556774 CNPY2Q9Y2B0 182 aa18.93■□□□□ 0.62
RCCD1-207ENST00000556774 SYNRGQ9UMZ2 1314 aa18.93■□□□□ 0.62
RCCD1-207ENST00000556774 KIAA0355O15063 1070 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms