RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TFRCP02786 760 aaKnown RBP8.74□□□□□ -1.01
SCFD1-222ENST00000556768 INHAP05111 366 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 ELNP15502 786 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 GJA8P48165 433 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 PDE4BQ07343 736 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 MTFR1Q15390 333 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 SBK1Q52WX2 424 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 SLC44A5Q8NCS7 719 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 OSBP2Q969R2 916 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 EVI5LQ96CN4 794 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 GPCPD1Q9NPB8 672 aa8.74□□□□□ -1.01
SCFD1-222ENST00000556768 CYP2D7A0A087X1C5 515 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 HMGCRP04035 888 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 XRCC5P13010 732 aaKnown RBP8.73□□□□□ -1.01
SCFD1-222ENST00000556768 RGS2P41220 211 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 PLEKHH3Q7Z736 793 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 TICAM2Q86XR7 235 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 MB21D1Q8N884 522 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 NAPBQ9H115 298 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 HMX1Q9NP08 348 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-222ENST00000556768 TMX2Q9Y320 296 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 DOCK2Q92608 1830 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 GSG1L2A8MUP6 293 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 EVI5O60447 810 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 FLOT1O75955 427 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 SGPL1O95470 568 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 CHGBP05060 677 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 AKR1B1P15121 316 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 CYP2B6P20813 491 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 GUCY1A2P33402 732 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 LBX2Q6XYB7 198 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 U2AF1L4Q8WU68 220 aaKnown RBP8.73□□□□□ -1.01
SCFD1-222ENST00000556768 DPF3Q92784 378 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 DEFB118Q96PH6 123 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 HTATIP2Q9BUP3 242 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 TXNRD2Q9NNW7 524 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 NPDC1Q9NQX5 325 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-222ENST00000556768 SLC5A4Q9NY91 659 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 GJD2Q9UKL4 321 aa8.73□□□□□ -1.01
SCFD1-222ENST00000556768 KIAA0100Q14667 2235 aaKnown RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 RPTORQ8N122 1335 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 A0A1W2PRG0 241 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 TRIM6-TRIM34B2RNG4 842 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 WDR46O15213 610 aaKnown RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 STRNO43815 780 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 EEF2P13639 858 aaKnown RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 ZKSCAN1P17029 563 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 PDE1AP54750 535 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 IRX5P78411 483 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 PLS1Q14651 629 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 Q3C1V9 767 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 B4GALNT3Q6L9W6 998 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 GPR142Q7Z601 462 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 IFNL3Q8IZI9 196 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 SPICE1Q8N0Z3 855 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 STK11IPQ8N1F8 1099 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 OTUD7AQ8TE49 926 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 UNC93B1Q9H1C4 597 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 VCPKMTQ9H867 229 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 CTDP1Q9Y5B0 961 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-222ENST00000556768 PDE4DIPQ5VU43 2346 aa8.72□□□□□ -1.01
SCFD1-222ENST00000556768 TSPY3P0CV98 308 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 TSPY8P0CW00 308 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 EVX2Q03828 476 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 MFSD14CQ5VZR4 134 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 DPP9Q86TI2 863 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 LNPKQ9C0E8 428 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 PORCNQ9H237 461 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 STAP2Q9UGK3 403 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 MAST2Q6P0Q8 1798 aa8.71□□□□□ -1.01
SCFD1-222ENST00000556768 LAMB1P07942 1786 aa8.71□□□□□ -1.02
SCFD1-222ENST00000556768 SLC15A5A6NIM6 579 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 C19orf67A6NJJ6 358 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 M0R2C6 588 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 MFAP1P55081 439 aaKnown RBP8.7□□□□□ -1.02
SCFD1-222ENST00000556768 ZMYM1Q5SVZ6 1142 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 RILPL2Q969X0 211 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 CCDC97Q96F63 343 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-222ENST00000556768 SPATC1LQ9H0A9 340 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 MROH8Q9H579 483 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 PAK6Q9NQU5 681 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-222ENST00000556768 HELLSQ9NRZ9 838 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 SUPT16HQ9Y5B9 1047 aaKnown RBP8.7□□□□□ -1.02
SCFD1-222ENST00000556768 NR2E3Q9Y5X4 410 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 DOCK1Q14185 1865 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 PEX10O60683 326 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 FARP2O94887 1054 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-222ENST00000556768 SLC25A27O95847 323 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 TTLL1O95922 423 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 PTPREP23469 700 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 CHD1LQ86WJ1 897 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 SEC62Q99442 399 aaKnown RBP8.7□□□□□ -1.02
SCFD1-222ENST00000556768 APBA2Q99767 749 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms