RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 ATG4CQ96DT6 458 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 F5H6K3 240 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 HOXC6P09630 235 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 COPB2P35606 906 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 TFAP4Q01664 338 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 KLRC3Q07444 240 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 TRIM32Q13049 653 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 GRB14Q14449 540 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 ALX1Q15699 326 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 MAP3K21Q5TCX8 1036 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 NEDD1Q8NHV4 660 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 MKL1Q969V6 931 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 OSBPL3Q9H4L5 887 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
XRCC3-216ENST00000556682 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
XRCC3-216ENST00000556682 PDE4DIPQ5VU43 2346 aa12.82□□□□□ -0.36
XRCC3-216ENST00000556682 IGKV6D-41A0A0C4DH26 115 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 HIP1O00291 1037 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 VWA5AO00534 786 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 FCER1AP12319 257 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 CACNB2Q08289 660 aaPredicted RBP12.81□□□□□ -0.36
XRCC3-216ENST00000556682 NECAB2Q7Z6G3 386 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 UBE2Q1Q7Z7E8 422 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 PLEKHM2Q8IWE5 1019 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 ABRAQ8N0Z2 381 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 PRPF38AQ8NAV1 312 aaKnown RBP12.81□□□□□ -0.36
XRCC3-216ENST00000556682 CEP95Q96GE4 821 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 ADAMTS5Q9UNA0 930 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 NR2E3Q9Y5X4 410 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 CENPFP49454 3210 aa12.81□□□□□ -0.36
XRCC3-216ENST00000556682 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 NDUFB10O96000 172 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 ADORA2AP29274 412 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 STAT3P40763 770 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 TMEM132BQ14DG7 1078 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 CCL14Q16627 93 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 RIOX2Q8IUF8 465 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 FAM227BQ96M60 508 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 FBXO28Q9NVF7 368 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 ANAPC4Q9UJX5 808 aa12.8□□□□□ -0.36
XRCC3-216ENST00000556682 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 RANBP6O60518 1105 aaKnown RBP12.79□□□□□ -0.36
XRCC3-216ENST00000556682 MSCO60682 206 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 ZBED4O75132 1171 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 FGAP02671 866 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 SDSP20132 328 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 CTDSPL2Q05D32 466 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
XRCC3-216ENST00000556682 KCTD2Q14681 263 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 OLFML2BQ68BL8 750 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 GMCL1P1Q8NEA9 526 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
XRCC3-216ENST00000556682 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 FEM1BQ9UK73 627 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 OGDHLQ9ULD0 1010 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 STX8Q9UNK0 236 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
XRCC3-216ENST00000556682 TNRC18O15417 2968 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 FOXP2O15409 715 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 FDX1P10109 184 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 PCP11498 1178 aaKnown RBP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 CNGA1P29973 690 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 NPLOC4Q8TAT6 608 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 MMP19Q99542 508 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
XRCC3-216ENST00000556682 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
XRCC3-216ENST00000556682 ORC4O43929 436 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 EVI5O60447 810 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 FGRP09769 529 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 BMP3P12645 472 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-216ENST00000556682 SLC1A4P43007 532 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 MFSD6Q6ZSS7 791 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.37
XRCC3-216ENST00000556682 CHURC1Q8WUH1 139 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 KIFC2Q96AC6 838 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 RNF41Q9H4P4 317 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-216ENST00000556682 C11orf49Q9H6J7 331 aa12.77□□□□□ -0.37
XRCC3-216ENST00000556682 FLRT1Q9NZU1 646 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms