RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ARMC9Q7Z3E5 817 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 ZNF438Q7Z4V0 828 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 FBXO33Q7Z6M2 555 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 RNF168Q8IYW5 571 aaPredicted RBP7.05□□□□□ -1.28
TDP1-215ENST00000556498 CLASRPQ8N2M8 674 aaKnown RBP7.05□□□□□ -1.28
TDP1-215ENST00000556498 IL17RAQ96F46 866 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 DDX11Q96FC9 970 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 MRFAP1L1Q96HT8 127 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 PDLIM2Q96JY6 352 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 NEK1Q96PY6 1258 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 RUFY1Q96T51 708 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 TCHPQ9BT92 498 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 BCL2L13Q9BXK5 485 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 TAOK3Q9H2K8 898 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 ELP3Q9H9T3 547 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 MKS1Q9NXB0 559 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 ASAP1Q9ULH1 1129 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 SSX2IPQ9Y2D8 614 aa7.05□□□□□ -1.28
TDP1-215ENST00000556498 RRP15Q9Y3B9 282 aaKnown RBP7.05□□□□□ -1.28
TDP1-215ENST00000556498 AKNAQ7Z591 1439 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 KIAA1107Q9UPP5 1409 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 SGTAO43765 313 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 TNFRSF21O75509 655 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 SASH3O75995 380 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 P4HBP07237 508 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 VIL1P09327 827 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 TSPY4P0CV99 314 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 TSPY10P0CW01 314 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 MYCLP1P12525 358 aaPredicted RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 ZFXP17010 805 aaPredicted RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 CD33P20138 364 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 FGFR3P22607 806 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 PAPOLAP51003 745 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 MRPL12P52815 198 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 GRIN2CQ14957 1233 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 SUZ12Q15022 739 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 TAF11Q15544 211 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 RRP12Q5JTH9 1297 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 FAM182BQ5T319 152 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 CAVIN1Q6NZI2 390 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 SYT10Q6XYQ8 523 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 KIF18AQ8NI77 898 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 UHMK1Q8TAS1 419 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 FAM81AQ8TBF8 368 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 LZICQ8WZA0 190 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 N4BP2L2Q92802 583 aaPredicted RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 RBM17Q96I25 401 aaKnown RBP7.04□□□□□ -1.28
TDP1-215ENST00000556498 SPACA7Q96KW9 195 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 BATF3Q9NR55 127 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 PSD3Q9NYI0 1048 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 IL20Q9NYY1 176 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 RGL1Q9NZL6 768 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 LMCD1Q9NZU5 365 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 MYO6Q9UM54 1294 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 SQORQ9Y6N5 450 aa7.04□□□□□ -1.28
TDP1-215ENST00000556498 IQCA1LA6NCM1 817 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 H3BM21 787 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 KIF2AO00139 706 aaPredicted RBP7.03□□□□□ -1.28
TDP1-215ENST00000556498 FGAP02671 866 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 TARSP26639 723 aaKnown RBP7.03□□□□□ -1.28
TDP1-215ENST00000556498 VEGFBP49765 207 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 CTBSQ01459 385 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 MECOMQ03112 1051 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 SPEM2Q0P670 501 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 BOLA3Q53S33 107 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 EAPPQ56P03 285 aaPredicted RBP7.03□□□□□ -1.28
TDP1-215ENST00000556498 SPDYCQ5MJ68 293 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 DUSP27Q5VZP5 1158 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 SDE2Q6IQ49 451 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 SKAP1Q86WV1 359 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 CEP57Q86XR8 500 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 AFAP1Q8N556 730 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 BICD2Q8TD16 824 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 ZFPM2Q8WW38 1151 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 EZH1Q92800 747 aaPredicted RBP7.03□□□□□ -1.28
TDP1-215ENST00000556498 SLC30A3Q99726 388 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 XPO4Q9C0E2 1151 aaKnown RBP7.03□□□□□ -1.28
TDP1-215ENST00000556498 SLKQ9H2G2 1235 aaPredicted RBP7.03□□□□□ -1.28
TDP1-215ENST00000556498 ZNF304Q9HCX3 659 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 KRT82Q9NSB4 513 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 TBC1D7Q9P0N9 293 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 PRR12Q9ULL5 1215 aa7.03□□□□□ -1.28
TDP1-215ENST00000556498 GOLGA6L9A6NEM1 432 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 P4HA2O15460 535 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 RBP3P10745 1247 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 IL4RP24394 825 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 MAPK8P45983 427 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 ADCY1Q08828 1119 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 ORC1Q13415 861 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 MYBPC3Q14896 1274 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 RCN1Q15293 331 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 PLEKHG6Q3KR16 790 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 NAA16Q6N069 864 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms