RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
LINC01550-206ENST00000556462 GMCL1P1Q8NEA9 526 aa12.51□□□□□ -0.41
LINC01550-206ENST00000556462 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
LINC01550-206ENST00000556462 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
LINC01550-206ENST00000556462 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
LINC01550-206ENST00000556462 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
LINC01550-206ENST00000556462 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 SOCS7O14512 581 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 ASNSP08243 561 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 ECE1P42892 770 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 SLFN13Q68D06 897 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 ATL3Q6DD88 541 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 KCTD1Q719H9 257 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 DIS3L2Q8IYB7 885 aaKnown RBP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 TMX2Q9Y320 296 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 LEO1Q8WVC0 666 aaPredicted RBP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 FTOQ9C0B1 505 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 SCAND2PQ9GZW5 306 aaPredicted RBP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
LINC01550-206ENST00000556462 VAT1LQ9HCJ6 419 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
LINC01550-206ENST00000556462 MYH6P13533 1939 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 CTNND1O60716 968 aaKnown RBP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 NDUFB10O96000 172 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 SLC1A4P43007 532 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 NR5A1Q13285 461 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 SAFBQ15424 915 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 GPKOWQ92917 476 aaPredicted RBP eCLIP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 PIGSQ96S52 555 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 ELP1O95163 1332 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 SLC16A2P36021 539 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 KIAA1755Q5JYT7 1200 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 RRP36Q96EU6 259 aaKnown RBP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
LINC01550-206ENST00000556462 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 ARHGEF10LQ9HCE6 1279 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 BARHL2Q9NY43 387 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 RCOR1Q9UKL0 485 aa12.49□□□□□ -0.41
LINC01550-206ENST00000556462 POTECB2RU33 542 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 ADAMTS3O15072 1205 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 RAD21O60216 631 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 INPP5BP32019 993 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
LINC01550-206ENST00000556462 GNL2Q13823 731 aaKnown RBP12.48□□□□□ -0.41
LINC01550-206ENST00000556462 CSPP1Q1MSJ5 1256 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 CCDC96Q2M329 555 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 DLK2Q6UY11 383 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 USP50Q70EL3 339 aaPredicted RBP12.48□□□□□ -0.41
LINC01550-206ENST00000556462 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 HOOK2Q96ED9 719 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 MTMR8Q96EF0 704 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 GINM1Q9NU53 330 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
LINC01550-206ENST00000556462 POLR2AP24928 1970 aaKnown RBP12.48□□□□□ -0.41
LINC01550-206ENST00000556462 STXBP3O00186 592 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 EPHX2P34913 555 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 NLRP5P59047 1200 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 UBE2HP62256 183 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 TNFRSF25Q93038 417 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 DCPSQ96C86 337 aaKnown RBP12.47□□□□□ -0.41
LINC01550-206ENST00000556462 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
LINC01550-206ENST00000556462 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 KRT2P35908 639 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 TOB1P50616 345 aaPredicted RBP12.47□□□□□ -0.41
LINC01550-206ENST00000556462 SUPT20HL1Q3ZLR7 823 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
LINC01550-206ENST00000556462 HEATR3Q7Z4Q2 680 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
LINC01550-206ENST00000556462 SEC63Q9UGP8 760 aaKnown RBP12.47□□□□□ -0.41
LINC01550-206ENST00000556462 SSC5DA1L4H1 1573 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms