RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TMEM132AQ24JP5 1023 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 SCG2P13521 617 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 ARHGAP25P42331 645 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 EXOSC10Q01780 885 aaKnown RBP16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 KRT25Q7Z3Z0 450 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 NLRC4Q9NPP4 1024 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 GOLGA8KD6RF30 607 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 PICALMQ13492 652 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 ASIC2Q16515 512 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 SAP30BPQ9UHR5 308 aaKnown RBP16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 ERBB3P21860 1342 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 MB21D2Q8IYB1 491 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 EPSTI1Q96J88 318 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 MFAP3LO75121 409 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 LIFRP42702 1097 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 LIG3P49916 1009 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 VWA3BQ502W6 1294 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 DPF2Q92785 391 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 LRRC45Q96CN5 670 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 STMN4Q9H169 189 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 UBE4AQ14139 1066 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 NCAPH2Q6IBW4 605 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 ZNF609O15014 1411 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 CEP104O60308 925 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 TFAP4Q01664 338 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
ARHGEF40-207ENST00000556399 GUCY2FP51841 1108 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■■□□□ 12.4
ARHGEF40-207ENST00000556399 TMEM110-MUSTN1A8MSY1 372 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 B4DLN1 442 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 TADA3O75528 432 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 TCP1P17987 556 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 PTPREP23469 700 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 LONP1P36776 959 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 CCT5P48643 541 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 ATP1A2P50993 1020 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 SFMBT2Q5VUG0 894 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 TRMT1LQ7Z2T5 733 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 PRKAB2O43741 272 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 INF2Q27J81 1249 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 SHC4Q6S5L8 630 aa16.71■□□□□ 0.27
ARHGEF40-207ENST00000556399 KLHL30Q0D2K2 578 aa16.71■□□□□ 0.26
ARHGEF40-207ENST00000556399 TBC1D10CQ8IV04 446 aa16.71■□□□□ 0.26
ARHGEF40-207ENST00000556399 TUBGCP2Q9BSJ2 902 aa16.71■□□□□ 0.26
ARHGEF40-207ENST00000556399 SAMD15Q9P1V8 674 aa16.71■□□□□ 0.26
ARHGEF40-207ENST00000556399 KCNJ6P48051 423 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 ZNF804AQ7Z570 1209 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 E7EVH7 732 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 RUFY4Q6ZNE9 571 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 GPKOWQ92917 476 aaPredicted RBP eCLIP16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 PIH1D3Q9NQM4 214 aaKnown RBP16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 WDR24Q96S15 920 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 BUB1O43683 1085 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 KCNB2Q92953 911 aa16.7■□□□□ 0.26
ARHGEF40-207ENST00000556399 FRMPD1Q5SYB0 1578 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 ADGRL3Q9HAR2 1447 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 DDAH1O94760 285 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 NDUFA10O95299 355 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 ZNF658Q5TYW1 1059 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 CABS1Q96KC9 395 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 MTRF1LQ9UGC7 380 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 MRFAP1Q9Y605 127 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 CAPN7Q9Y6W3 813 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 CETN3O15182 167 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 TTC19Q6DKK2 380 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 TRIM31Q9BZY9 425 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 KRT31Q15323 416 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 TFCP2L1Q9NZI6 479 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 MYO1CO00159 1063 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 MCAMP43121 646 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 CALCRLQ16602 461 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 CCDC25Q86WR0 208 aa16.69■□□□□ 0.26
ARHGEF40-207ENST00000556399 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 RPL13P26373 211 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-207ENST00000556399 GYG1P46976 350 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms