RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SLC23A3Q6PIS1 610 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 ARHGAP27Q6ZUM4 889 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 C22orf34Q6ZV56 151 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 FAM214BQ7L5A3 538 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 SPRED2Q7Z698 418 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-241ENST00000556374 GPBAR1Q8TDU6 330 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 COX4I2Q96KJ9 171 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 C8orf37Q96NL8 207 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 ASB16Q96NS5 453 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 SPG7Q9UQ90 795 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 ATRNO75882 1429 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 ERBINQ96RT1 1412 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 ENC1O14682 589 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 CD8BP10966 210 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 CAP2P40123 477 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 ATP2B2Q01814 1243 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 ANGEL2Q5VTE6 544 aaKnown RBP5.76□□□□□ -1.49
ATXN3-241ENST00000556374 PLD6Q8N2A8 252 aaKnown RBP5.76□□□□□ -1.49
ATXN3-241ENST00000556374 SSU72Q9NP77 194 aaKnown RBP5.76□□□□□ -1.49
ATXN3-241ENST00000556374 LMCD1Q9NZU5 365 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 FAM8A1Q9UBU6 413 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 MAPK8IP1Q9UQF2 711 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 EID1Q9Y6B2 187 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 PNPLA6Q8IY17 1366 aa5.76□□□□□ -1.49
ATXN3-241ENST00000556374 PRAG1Q86YV5 1406 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 NCOA3Q9Y6Q9 1424 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 COL22A1Q8NFW1 1626 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-241ENST00000556374 CLCN7P51798 805 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 AOC3Q16853 763 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 CCDC184Q52MB2 194 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 LLGL2Q6P1M3 1020 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 PI16Q6UXB8 463 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 SV2BQ7L1I2 683 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 FLAD1Q8NFF5 587 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 PI4K2BQ8TCG2 481 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 ZNF507Q8TCN5 953 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 STK35Q8TDR2 534 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 ACSBG1Q96GR2 724 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 PRDM10Q9NQV6 1147 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 NOP58Q9Y2X3 529 aaKnown RBP5.75□□□□□ -1.49
ATXN3-241ENST00000556374 SNCAIPQ9Y6H5 919 aa5.75□□□□□ -1.49
ATXN3-241ENST00000556374 LRIG2O94898 1065 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 C8AP07357 584 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 NTF4P34130 210 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 BNIP3Q12983 259 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 CDC37L1Q7L3B6 337 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 LGR6Q9HBX8 967 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 CBX8Q9HC52 389 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 FAM53CQ9NYF3 392 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 PLAGL2Q9UPG8 496 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 LRPPRCP42704 1394 aaKnown RBP5.74□□□□□ -1.49
ATXN3-241ENST00000556374 RGPD1P0DJD0 1748 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 DCCP43146 1447 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 ARHGAP31Q2M1Z3 1444 aa5.74□□□□□ -1.49
ATXN3-241ENST00000556374 CAMTA1Q9Y6Y1 1673 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 GLI3P10071 1580 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 INSRP06213 1382 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 EIF3AQ14152 1382 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 LEFTY1O75610 366 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 FARP2O94887 1054 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 RNASE1P07998 156 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 RPS26P62854 115 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 ZBTB37Q5TC79 503 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 ZNF746Q6NUN9 644 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 ZNF574Q6ZN55 896 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 TOP6BLQ8N6T0 577 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 MFSD2AQ8NA29 543 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 HEXIM2Q96MH2 286 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 OSBPL7Q9BZF2 842 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 C12orf49Q9H741 205 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 RC3H2Q9HBD1 1191 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 MBNL3Q9NUK0 354 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 NALCNQ8IZF0 1738 aa5.73□□□□□ -1.49
ATXN3-241ENST00000556374 XRN1Q8IZH2 1706 aaKnown RBP5.73□□□□□ -1.49
ATXN3-241ENST00000556374 PARD3Q8TEW0 1356 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 TNS1Q9HBL0 1735 aaKnown RBP5.72□□□□□ -1.49
ATXN3-241ENST00000556374 ST20-MTHFSA0A0A6YYL1 179 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 RRP1P56182 461 aaKnown RBP5.72□□□□□ -1.49
ATXN3-241ENST00000556374 TMF1P82094 1093 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 BRINP3Q76B58 766 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 FAM181AQ8N9Y4 354 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 CCDC120Q96HB5 630 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 SLC26A8Q96RN1 970 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 ARID3AQ99856 593 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 TRPC5Q9UL62 973 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-241ENST00000556374 TRPM2O94759 1503 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 PTCH1Q13635 1447 aa5.72□□□□□ -1.49
ATXN3-241ENST00000556374 GPRASP1Q5JY77 1395 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 GNAT3A8MTJ3 354 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 ZNF865P0CJ78 1059 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-241ENST00000556374 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 TPTE2Q6XPS3 522 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 CYFIP1Q7L576 1253 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 HDXQ7Z353 690 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 DEFB132Q7Z7B7 95 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 SPACA3Q8IXA5 215 aa5.71□□□□□ -1.5
ATXN3-241ENST00000556374 PNISRQ8TF01 805 aaKnown RBP5.71□□□□□ -1.5
ATXN3-241ENST00000556374 FAM168AQ92567 244 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms