RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 DBF4Q9UBU7 674 aaPredicted RBP11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 SLC6A14Q9UN76 642 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 CCDC85CA6NKD9 419 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 EGFRP00533 1210 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 GPSM2P81274 684 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 TRIM11Q96F44 468 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 DNAJB12Q9NXW2 375 aaKnown RBP11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
GTF2A1-204ENST00000556268 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 SASH3O75995 380 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 HUNKP57058 714 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 MLLT1Q03111 559 aaPredicted RBP11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 RGMBQ6NW40 437 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 C8orf86Q6ZUL3 223 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 MCOLN1Q9GZU1 580 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 DBNDD1Q9H9R9 158 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 C11orf16Q9NQ32 467 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 KCNMB2Q9Y691 235 aa11.6□□□□□ -0.55
GTF2A1-204ENST00000556268 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 IRS4O14654 1257 aaPredicted RBP11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 XYLBO75191 536 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 MAP3K6O95382 1288 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 RARAP10276 462 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 DUSP27Q5VZP5 1158 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 KRT26Q7Z3Y9 468 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 EYA3Q99504 573 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 STIM2Q9P246 746 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 NAGPAQ9UK23 515 aa11.59□□□□□ -0.55
GTF2A1-204ENST00000556268 ECE2O60344 883 aa11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 ZNF280AP59817 542 aaPredicted RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 TBC1D10BQ4KMP7 808 aaPredicted RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 C2orf69Q8N8R5 385 aa11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 DCPSQ96C86 337 aaKnown RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 GMLQ99445 158 aa11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 ZNF408Q9H9D4 720 aa11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 SAGE1Q9NXZ1 904 aa11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 NOP53Q9NZM5 478 aaKnown RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.56
GTF2A1-204ENST00000556268 TAF1P21675 1872 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 LAMB2P55268 1798 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 ZAP70P43403 619 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 KIF23Q02241 960 aaPredicted RBP11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 PLA2G4EQ3MJ16 856 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 C20orf204Q6ZNR8 217 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 DHX32Q7L7V1 743 aaKnown RBP11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 ALYREFQ86V81 257 aaKnown RBP11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 CSRNP1Q96S65 589 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 PRDM6Q9NQX0 595 aa11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
GTF2A1-204ENST00000556268 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 KRBA1A5PL33 1030 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 ZBTB39O15060 712 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 ITGB2P05107 769 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 HSP90B1P14625 803 aaKnown RBP11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 COL9A3Q14050 684 aaPredicted RBP11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 AGBL3Q8NEM8 1001 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 PLVAPQ9BX97 442 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 RNF186Q9NXI6 227 aa11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 POLR2AP24928 1970 aaKnown RBP11.56□□□□□ -0.56
GTF2A1-204ENST00000556268 ADM5C9JUS6 153 aa11.55□□□□□ -0.56
GTF2A1-204ENST00000556268 PCCAP05165 728 aaPredicted RBP11.55□□□□□ -0.56
GTF2A1-204ENST00000556268 ZNF157P51786 506 aaPredicted RBP11.55□□□□□ -0.56
GTF2A1-204ENST00000556268 PHAXQ9H814 394 aaKnown RBP11.55□□□□□ -0.56
GTF2A1-204ENST00000556268 LRRC37AA6NMS7 1700 aa11.55□□□□□ -0.56
GTF2A1-204ENST00000556268 ZNF609O15014 1411 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 PDE8AO60658 829 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 CCDC152Q4G0S7 254 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 USTQ9Y2C2 406 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 COL4A1P02462 1669 aa11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 ASTN2O75129 1339 aaPredicted RBP11.54□□□□□ -0.56
GTF2A1-204ENST00000556268 DDX60Q8IY21 1712 aaKnown RBP11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 ZBTB42B2RXF5 422 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 TRPA1O75762 1119 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 NID1P14543 1247 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 FKBP1BP68106 108 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 PSAPL1Q6NUJ1 521 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 FAM35AQ86V20 835 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 GPR152Q8TDT2 470 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms