RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 DNAH12Q6ZR08 3092 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 PLEKHM2Q8IWE5 1019 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 TMC2Q8TDI7 906 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 RNF208Q9H0X6 261 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 IL25Q9H293 177 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 PRO3102Q9H379 93 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 ATP8A2Q9NTI2 1148 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 FBXO28Q9NVF7 368 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 BIN2Q9UBW5 565 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-209ENST00000556079 STAP2Q9UGK3 403 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 SLC45A1Q9Y2W3 748 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 SMCHD1A6NHR9 2005 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 EYSQ5T1H1 3165 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 ROBO3Q96MS0 1386 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 SPDYE16A6NNV3 312 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-209ENST00000556079 SOX1O00570 391 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-209ENST00000556079 RAD21O60216 631 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 NMT2O60551 498 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 INHAP05111 366 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 GJB1P08034 283 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 EEF2P13639 858 aaKnown RBP7.64□□□□□ -1.19
TMEM260-209ENST00000556079 TDO2P48775 406 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 NUCB1Q02818 461 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 ICA1Q05084 483 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 FAM110CQ1W6H9 321 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 ZSCAN25Q6NSZ9 544 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 CHD1LQ86WJ1 897 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 IFNL3Q8IZI9 196 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 U2AF1L4Q8WU68 220 aaKnown RBP7.64□□□□□ -1.19
TMEM260-209ENST00000556079 RILPL2Q969X0 211 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 NBPF3Q9H094 633 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 KIAA1683Q9H0B3 1180 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 CABP5Q9NP86 173 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 ZNFX1Q9P2E3 1918 aaKnown RBP7.64□□□□□ -1.19
TMEM260-209ENST00000556079 FRMPD3Q5JV73 1810 aa7.64□□□□□ -1.19
TMEM260-209ENST00000556079 POTEB3A0JP26 581 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 TRIM6-TRIM34B2RNG4 842 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 C19orf81C9J6K1 198 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 ERC2O15083 957 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 ADCY3O60266 1144 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 IGSF3O75054 1194 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 FARP2O94887 1054 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-209ENST00000556079 GSPT1P15170 499 aaKnown RBP7.63□□□□□ -1.19
TMEM260-209ENST00000556079 CYP2B6P20813 491 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 HOXD10P28358 340 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 HOXA7P31268 230 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-209ENST00000556079 HAND2P61296 217 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 ERVK-9P63128 1117 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 ERVK-24P63145 666 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 FAM83BQ5T0W9 1011 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 POTEBQ6S5H4 581 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 CATSPERGQ6ZRH7 1159 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 TMEM179Q6ZVK1 233 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 CERS3Q8IU89 383 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 LRRC47Q8N1G4 583 aaKnown RBP7.63□□□□□ -1.19
TMEM260-209ENST00000556079 TRIB2Q92519 343 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 ATG4CQ96DT6 458 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 LRCH3Q96II8 777 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 C12orf42Q96LP6 360 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 HTATIP2Q9BUP3 242 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 TANGO6Q9C0B7 1094 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-209ENST00000556079 FLRT1Q9NZU1 646 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 MORF4L1Q9UBU8 362 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 GJD2Q9UKL4 321 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 PNMA3Q9UL41 463 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
TMEM260-209ENST00000556079 LAMA4Q16363 1823 aa7.63□□□□□ -1.19
TMEM260-209ENST00000556079 IGKV6D-41A0A0C4DH26 115 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L15C9J2P7 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L13C9JLJ4 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L11C9JVI0 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L18D6R9N7 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L22D6RA61 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L17D6RBQ6 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L19D6RCP7 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L20D6RJB6 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 DLL1O00548 723 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 SGPL1O95470 568 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 SNAP25P60880 206 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 UBXN2AP68543 259 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 PPARAQ07869 468 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 USP17L24Q0WX57 530 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 SBK1Q52WX2 424 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 ARSIQ5FYB1 569 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 WDR78Q5VTH9 848 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 TBC1D10CQ8IV04 446 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 SLC17A8Q8NDX2 589 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 DIS3LQ8TF46 1054 aaKnown RBP7.62□□□□□ -1.19
TMEM260-209ENST00000556079 DEFB118Q96PH6 123 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 ARPP21Q9UBL0 812 aaPredicted RBP7.62□□□□□ -1.19
TMEM260-209ENST00000556079 SWAP70Q9UH65 585 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 MTMR7Q9Y216 660 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 NR2E3Q9Y5X4 410 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 MCM3APO60318 1980 aa7.62□□□□□ -1.19
TMEM260-209ENST00000556079 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
TMEM260-209ENST00000556079 PATL2C9JE40 543 aaKnown RBP7.61□□□□□ -1.19
TMEM260-209ENST00000556079 NDUFB10O96000 172 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms