RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 DCAF15Q66K64 600 aa10.18□□□□□ -0.78
PSEN1-215ENST00000556011 UBALD2Q8IYN6 164 aa10.18□□□□□ -0.78
PSEN1-215ENST00000556011 HNRNPLLQ8WVV9 542 aaKnown RBP10.18□□□□□ -0.78
PSEN1-215ENST00000556011 PORCNQ9H237 461 aa10.18□□□□□ -0.78
PSEN1-215ENST00000556011 ZNF112Q9UJU3 913 aa10.18□□□□□ -0.78
PSEN1-215ENST00000556011 ABCA2Q9BZC7 2435 aa10.18□□□□□ -0.78
PSEN1-215ENST00000556011 MROH7Q68CQ1 1323 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 TK2O00142 265 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 NPR3P17342 541 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 SMPD1P17405 629 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 MAPK4P31152 587 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 CDK7P50613 346 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 SPEM2Q0P670 501 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 SF3B3Q15393 1217 aaKnown RBP10.17□□□□□ -0.78
PSEN1-215ENST00000556011 NOL9Q5SY16 702 aaKnown RBP10.17□□□□□ -0.78
PSEN1-215ENST00000556011 IL31Q6EBC2 164 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 PLEKHH3Q7Z736 793 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 PROSER1Q86XN7 944 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 PHF7Q9BWX1 381 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-215ENST00000556011 WNT8AQ9H1J5 351 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 HIPK3Q9H422 1215 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 NSUN3Q9H649 340 aaKnown RBP10.17□□□□□ -0.78
PSEN1-215ENST00000556011 XPNPEP3Q9NQH7 507 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 INCENPQ9NQS7 918 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 TRMT112Q9UI30 125 aaKnown RBP10.17□□□□□ -0.78
PSEN1-215ENST00000556011 AFG3L2Q9Y4W6 797 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 PAXBP1Q9Y5B6 917 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 ACACAQ13085 2346 aa10.17□□□□□ -0.78
PSEN1-215ENST00000556011 MAST3O60307 1309 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 NCK2O43639 380 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 EYA4O95677 639 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 CACNB3P54284 484 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
PSEN1-215ENST00000556011 MTMR3Q13615 1198 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 TMCO2Q7Z6W1 182 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-215ENST00000556011 RNF180Q86T96 592 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 FBXO22Q8NEZ5 403 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-215ENST00000556011 SCLYQ96I15 445 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 TXNRD2Q9NNW7 524 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 NDUFB9Q9Y6M9 179 aa10.16□□□□□ -0.78
PSEN1-215ENST00000556011 TRIM75PA6NK02 468 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 LINC01565O15544 149 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 PRAMEF19Q5SWL8 479 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 NPLOC4Q8TAT6 608 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 HOOK2Q96ED9 719 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 RTP3Q9BQQ7 232 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 SCNM1Q9BWG6 230 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 ASCC2Q9H1I8 757 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-215ENST00000556011 SEC31BQ9NQW1 1179 aa10.15□□□□□ -0.78
PSEN1-215ENST00000556011 SMG5Q9UPR3 1016 aaKnown RBP10.15□□□□□ -0.78
PSEN1-215ENST00000556011 CENPEQ02224 2701 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 LAMA1P25391 3075 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 LINC01553A4QN01 128 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 TM4SF5O14894 197 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 IGHA2P01877 340 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 ACLYP53396 1101 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 HYAL1Q12794 435 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 CCAR1Q8IX12 1150 aaKnown RBP10.14□□□□□ -0.79
PSEN1-215ENST00000556011 FAM126BQ8IXS8 530 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 GPRC5AQ8NFJ5 357 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 MSLNLQ96KJ4 702 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 UBL7Q96S82 380 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-215ENST00000556011 C17orf80Q9BSJ5 609 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 SORCS3Q9UPU3 1222 aa10.14□□□□□ -0.79
PSEN1-215ENST00000556011 SPENQ96T58 3664 aaKnown RBP10.13□□□□□ -0.79
PSEN1-215ENST00000556011 KCNK5O95279 499 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 GTF2F1P35269 517 aaKnown RBP eCLIP10.13□□□□□ -0.79
PSEN1-215ENST00000556011 MTHFSDQ2M296 383 aaKnown RBP10.13□□□□□ -0.79
PSEN1-215ENST00000556011 Q3C1V9 767 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 C4orf17Q53FE4 359 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 NLRP10Q86W26 655 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 IL17REQ8NFR9 667 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 NUP133Q8WUM0 1156 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 JARID2Q92833 1246 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-215ENST00000556011 RRP7AQ9Y3A4 280 aaKnown RBP10.13□□□□□ -0.79
PSEN1-215ENST00000556011 USP15Q9Y4E8 981 aaPredicted RBP10.13□□□□□ -0.79
PSEN1-215ENST00000556011 ATMQ13315 3056 aa10.13□□□□□ -0.79
PSEN1-215ENST00000556011 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 WISP1O95388 367 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 SEC24BO95487 1268 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 PTPRAP18433 802 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 TROAPQ12815 778 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 DEFB128Q7Z7B8 93 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 DZIP1LQ8IYY4 767 aaKnown RBP10.12□□□□□ -0.79
PSEN1-215ENST00000556011 MGAQ8IWI9 3026 aa10.12□□□□□ -0.79
PSEN1-215ENST00000556011 TLR3O15455 904 aaKnown RBP10.11□□□□□ -0.79
PSEN1-215ENST00000556011 CD4P01730 458 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 GP1BBP13224 206 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 MYL6BP14649 208 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 SMRP1Q8NCR6 262 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 IGFLR1Q9H665 355 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 APC2O95996 2303 aa10.11□□□□□ -0.79
PSEN1-215ENST00000556011 COL6A6A6NMZ7 2263 aa10.1□□□□□ -0.79
PSEN1-215ENST00000556011 TET1Q8NFU7 2136 aa10.1□□□□□ -0.79
PSEN1-215ENST00000556011 USP9YO00507 2555 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-215ENST00000556011 KIAA1217Q5T5P2 1943 aa10.1□□□□□ -0.79
PSEN1-215ENST00000556011 SP100P23497 879 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-215ENST00000556011 PSAPL1Q6NUJ1 521 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms