RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 BMP8BP34820 402 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 AAMPQ13685 434 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 TSHZ3Q63HK5 1081 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 TICAM2Q86XR7 235 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 MKNK2Q9HBH9 465 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 EPB41L4AQ9HCS5 686 aaPredicted RBP15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 PPP1R9AQ9ULJ8 1098 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 PARP14Q460N5 1801 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 LAMA3Q16787 3333 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 VWA5AO00534 786 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 MX1P20591 662 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 TMEM132BQ14DG7 1078 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 RIOX2Q8IUF8 465 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 GDF15Q99988 308 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 NACAP1Q9BZK3 213 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 NRBP1Q9UHY1 535 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 DNAH12Q6ZR08 3092 aa15.17■□□□□ 0.02
HNRNPC-221ENST00000555883 ALPK3Q96L96 1907 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 M0R2C6 588 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 FCER1AP12319 257 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 CYP2C19P33261 490 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 TDO2P48775 406 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 HDAC1Q13547 482 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 ZMYM1Q5SVZ6 1142 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 REPS2Q8NFH8 660 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 MKL1Q969V6 931 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 ZNF214Q9UL59 606 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 DIS3Q9Y2L1 958 aaKnown RBP15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 TRIOBPQ9H2D6 2365 aa15.16■□□□□ 0.02
HNRNPC-221ENST00000555883 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 F5H6K3 240 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 DNM1LO00429 736 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 ATP2A1O14983 1001 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 SEPT4O43236 478 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 COBLO75128 1261 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 KLRC3Q07444 240 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 PLS1Q14651 629 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 FAM83BQ5T0W9 1011 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 C7orf61Q8IZ16 206 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 ZNF444Q8N0Y2 327 aaPredicted RBP15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 MAML3Q96JK9 1138 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
HNRNPC-221ENST00000555883 APPP05067 770 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 STAT3P40763 770 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 PDE4BQ07343 736 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 PRPF38AQ8NAV1 312 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 GMCL1P1Q8NEA9 526 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 TRPV1Q8NER1 839 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 OTUD7AQ8TE49 926 aaPredicted RBP15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 SLF1Q9BQI6 1058 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 TEX13BQ9BXU2 312 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 FBXO28Q9NVF7 368 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 MTMR4Q9NYA4 1195 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 FRMPD3Q5JV73 1810 aa15.14■□□□□ 0.01
HNRNPC-221ENST00000555883 TTLL1O95922 423 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 NDUFB10O96000 172 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 CNGA1P29973 690 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 KCTD2Q14681 263 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 ARRDC4Q8NCT1 418 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 NEDD1Q8NHV4 660 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 EVI5LQ96CN4 794 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 NAPBQ9H115 298 aa15.13■□□□□ 0.01
HNRNPC-221ENST00000555883 FDX1P10109 184 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 OAZ1P54368 228 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 PPARAQ07869 468 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 ZNF792Q3KQV3 632 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 CEP95Q96GE4 821 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 SEC62Q99442 399 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 MMP19Q99542 508 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 CLIP2Q9UDT6 1046 aa15.12■□□□□ 0.01
HNRNPC-221ENST00000555883 TSPY3P0CV98 308 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 TSPY8P0CW00 308 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 ANKRD45Q5TZF3 282 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 GPR153Q6NV75 609 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 CRBNQ96SW2 442 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 TINF2Q9BSI4 451 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 ZMYND8Q9ULU4 1186 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-221ENST00000555883 FOXP2O15409 715 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 RAD21O60216 631 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 PRDM1O75626 825 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 PDE1AP54750 535 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 GMCL1Q96IK5 515 aa15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 NUP88Q99567 741 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 SENP6Q9GZR1 1112 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-221ENST00000555883 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms