RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 SLAIN1Q8ND83 568 aa16.24■□□□□ 0.19
SHMT2-219ENST00000555563 GMCL1P1Q8NEA9 526 aa16.24■□□□□ 0.19
SHMT2-219ENST00000555563 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
SHMT2-219ENST00000555563 MKL1Q969V6 931 aa16.24■□□□□ 0.19
SHMT2-219ENST00000555563 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
SHMT2-219ENST00000555563 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-219ENST00000555563 ZNF213O14771 459 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 ADCY3O60266 1144 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
SHMT2-219ENST00000555563 ELNP15502 786 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 CCAR1Q8IX12 1150 aaKnown RBP16.23■□□□□ 0.19
SHMT2-219ENST00000555563 MB21D1Q8N884 522 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 SOCS4Q8WXH5 440 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-219ENST00000555563 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 STX8Q9UNK0 236 aa16.23■□□□□ 0.19
SHMT2-219ENST00000555563 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 POTEFA5A3E0 1075 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 SGSM2O43147 1006 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-219ENST00000555563 WDR78Q5VTH9 848 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 PLEKHH3Q7Z736 793 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 MOV10L1Q9BXT6 1211 aaKnown RBP16.22■□□□□ 0.19
SHMT2-219ENST00000555563 SPATC1LQ9H0A9 340 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 CWC22Q9HCG8 908 aaKnown RBP16.22■□□□□ 0.19
SHMT2-219ENST00000555563 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 ZNF236Q9UL36 1845 aa16.22■□□□□ 0.19
SHMT2-219ENST00000555563 VWA5AO00534 786 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 NOVP48745 357 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 PLS1Q14651 629 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 MTFR1Q15390 333 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
SHMT2-219ENST00000555563 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 NUDT12Q9BQG2 462 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 BIN2Q9UBW5 565 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-219ENST00000555563 ADAMTS5Q9UNA0 930 aa16.21■□□□□ 0.19
SHMT2-219ENST00000555563 INHAP05111 366 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 PTH1RQ03431 593 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 TMEM132BQ14DG7 1078 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 MORN1Q5T089 497 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 RASGRP2Q7LDG7 609 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 ESR2Q92731 530 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 TCP11L1Q9NUJ3 509 aa16.2■□□□□ 0.18
SHMT2-219ENST00000555563 BMP3P12645 472 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 ERCC3P19447 782 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 CYP2B6P20813 491 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 UBXN2AP68543 259 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 SHCBP1Q8NEM2 672 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 REPS2Q8NFH8 660 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 TRIB2Q92519 343 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 USP6NLQ92738 828 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 APBA2Q99767 749 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
SHMT2-219ENST00000555563 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
SHMT2-219ENST00000555563 SLC15A5A6NIM6 579 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 B4E1Z4 1266 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 KDM4AO75164 1064 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 HMGCRP04035 888 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
SHMT2-219ENST00000555563 CCL5P13501 91 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 PTPREP23469 700 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 MCCP23508 829 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 RGS2P41220 211 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 SLC1A4P43007 532 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 MAP2K5Q13163 448 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 GRB14Q14449 540 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 UNC93B1Q9H1C4 597 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-219ENST00000555563 MTMR7Q9Y216 660 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 IVNS1ABPQ9Y6Y0 642 aa16.18■□□□□ 0.18
SHMT2-219ENST00000555563 TOP1P11387 765 aaKnown RBP16.17■□□□□ 0.18
SHMT2-219ENST00000555563 EN2P19622 333 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-219ENST00000555563 NT5C2P49902 561 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 TRIM32Q13049 653 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 RCSD1Q6JBY9 416 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 NCAPG2Q86XI2 1143 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 RIOX2Q8IUF8 465 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 PRPF38AQ8NAV1 312 aaKnown RBP16.17■□□□□ 0.18
SHMT2-219ENST00000555563 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-219ENST00000555563 CENPFP49454 3210 aa16.17■□□□□ 0.18
SHMT2-219ENST00000555563 TMEM232C9JQI7 657 aa16.16■□□□□ 0.18
SHMT2-219ENST00000555563 CYP21A2P08686 494 aa16.16■□□□□ 0.18
SHMT2-219ENST00000555563 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-219ENST00000555563 STAT2P52630 851 aa16.16■□□□□ 0.18
SHMT2-219ENST00000555563 CCL14Q16627 93 aa16.16■□□□□ 0.18
SHMT2-219ENST00000555563 CCDC96Q2M329 555 aa16.16■□□□□ 0.18
SHMT2-219ENST00000555563 KCTD1Q719H9 257 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms