RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 DDAH1O94760 285 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 CALM1P0DP23 149 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 CALM2P0DP24 149 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 CALM3P0DP25 149 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 PDHBP11177 359 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 NEK4P51957 841 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 MAP2K1Q02750 393 aaPredicted RBP16.7■□□□□ 0.26
CHD8-208ENST00000555301 RABEP1Q15276 862 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 FAM83BQ5T0W9 1011 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 CATSPERGQ6ZRH7 1159 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 ZNF654Q8IZM8 581 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 BRF1Q92994 677 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 MAP3K14Q99558 947 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 TANGO6Q9C0B7 1094 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
CHD8-208ENST00000555301 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
CHD8-208ENST00000555301 TROAPQ12815 778 aa16.69■□□□□ 0.26
CHD8-208ENST00000555301 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
CHD8-208ENST00000555301 GPATCH4Q5T3I0 446 aaKnown RBP16.69■□□□□ 0.26
CHD8-208ENST00000555301 PARK7Q99497 189 aaKnown RBP16.69■□□□□ 0.26
CHD8-208ENST00000555301 FEM1BQ9UK73 627 aa16.69■□□□□ 0.26
CHD8-208ENST00000555301 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
CHD8-208ENST00000555301 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 PLA2G6O60733 806 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
CHD8-208ENST00000555301 RCAN1P53805 252 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 ZNF543Q08ER8 600 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
CHD8-208ENST00000555301 COG2Q14746 738 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 CHURC1Q8WUH1 139 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 NUP133Q8WUM0 1156 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
CHD8-208ENST00000555301 HOXC10Q9NYD6 342 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 MYPNQ86TC9 1320 aa16.68■□□□□ 0.26
CHD8-208ENST00000555301 THSD7BQ9C0I4 1608 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 ZBTB43O43298 467 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 FLOT1O75955 427 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 KIF5BP33176 963 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 STAT2P52630 851 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 EVCP57679 992 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 TAF1CQ15572 869 aaPredicted RBP16.67■□□□□ 0.26
CHD8-208ENST00000555301 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 KCTD1Q719H9 257 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 FAM160B2Q86V87 743 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
CHD8-208ENST00000555301 SMCR8Q8TEV9 937 aaPredicted RBP16.67■□□□□ 0.26
CHD8-208ENST00000555301 GTF3C2Q8WUA4 911 aaPredicted RBP16.67■□□□□ 0.26
CHD8-208ENST00000555301 CHMP4CQ96CF2 233 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
CHD8-208ENST00000555301 ZFYVE28Q9HCC9 887 aa16.67■□□□□ 0.26
CHD8-208ENST00000555301 CA12O43570 354 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 ST18O60284 1047 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 AK2P54819 239 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
CHD8-208ENST00000555301 GRM4Q14833 912 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 PPP2R5BQ15173 497 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 MICU3Q86XE3 530 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
CHD8-208ENST00000555301 SLF1Q9BQI6 1058 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 CFHR5Q9BXR6 569 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 SAGE1Q9NXZ1 904 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
CHD8-208ENST00000555301 NAP1L2Q9ULW6 460 aaPredicted RBP16.66■□□□□ 0.26
CHD8-208ENST00000555301 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
CHD8-208ENST00000555301 LOC285556D6RIA3 1793 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
CHD8-208ENST00000555301 CYP2C8P10632 490 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 DSG3P32926 999 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 GCLCP48506 637 aaPredicted RBP16.65■□□□□ 0.26
CHD8-208ENST00000555301 GNAQP50148 359 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 HERVK_113P62684 666 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 LBX2Q6XYB7 198 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 FANCBQ8NB91 859 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
CHD8-208ENST00000555301 P2RX7Q99572 595 aaKnown RBP16.65■□□□□ 0.26
CHD8-208ENST00000555301 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
CHD8-208ENST00000555301 RNF186Q9NXI6 227 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
CHD8-208ENST00000555301 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 SPDYE16A6NNV3 312 aaPredicted RBP16.64■□□□□ 0.25
CHD8-208ENST00000555301 GOLGA8BA8MQT2 603 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 TLR2O60603 784 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 TRPA1O75762 1119 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 FDX1P10109 184 aa16.64■□□□□ 0.25
CHD8-208ENST00000555301 METAP2P50579 478 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHD8-208ENST00000555301 MB21D1Q8N884 522 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms