RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 SLC26A8Q96RN1 970 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 DBNDD2Q9BQY9 259 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 METTL22Q9BUU2 404 aaPredicted RBP7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 ASCC2Q9H1I8 757 aaPredicted RBP7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 CBX7O95931 251 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZNF865P0CJ78 1059 aaPredicted RBP7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 GSK3AP49840 483 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 NFIAQ12857 509 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 PLA2G4EQ3MJ16 856 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 EGFLAMQ63HQ2 1017 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 POMZP3Q6PJE2 187 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZNF765Q7L2R6 523 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 TMEM151AQ8N4L1 468 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZBTB38Q8NAP3 1195 aaPredicted RBP7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 DTWD2Q8NBA8 298 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 LRRN4CLQ8ND94 238 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 BVESQ8NE79 360 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 PIWIL2Q8TC59 973 aaKnown RBP7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 RCC1LQ96I51 464 aaKnown RBP7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 HEXIM2Q96MH2 286 aaKnown RBP7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 PRDM14Q9GZV8 571 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 FANCLQ9NW38 375 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 TMEM260Q9NX78 707 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 FHOD1Q9Y613 1164 aa7.92□□□□□ -1.14
CKS1BP1-201ENST00000555221 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 LRRN2O75325 713 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 H2AFB1P0C5Y9 115 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 H2AFB2P0C5Z0 115 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 HSP90AA2PQ14568 343 aaPredicted RBP7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 CPSF6Q16630 551 aaKnown RBP eCLIP7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 MFSD4AQ8N468 514 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 SYTL5Q8TDW5 730 aaPredicted RBP7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 ATG3Q9NT62 314 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 APEX2Q9UBZ4 518 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 DIS3Q9Y2L1 958 aaKnown RBP7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 PTCH2Q9Y6C5 1203 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 CNTNAP4Q9C0A0 1308 aa7.91□□□□□ -1.14
CKS1BP1-201ENST00000555221 A0A1W2PQU0 124 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ESYT3A0FGR9 886 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ADCY3O60266 1144 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 F13BP05160 661 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ITGAVP06756 1048 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZNF445P59923 1031 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 NMIQ13287 307 aaPredicted RBP7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 SQSTM1Q13501 440 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 TMEM67Q5HYA8 995 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZNF227Q86WZ6 799 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 SYNPOQ8N3V7 929 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZNF513Q8N8E2 541 aaPredicted RBP7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 ENOX1Q8TC92 643 aaKnown RBP7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 Q96M66 194 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 KANSL2Q9H9L4 492 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 AKT3Q9Y243 479 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 LEMD3Q9Y2U8 911 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 CAPN6Q9Y6Q1 641 aa7.9□□□□□ -1.14
CKS1BP1-201ENST00000555221 CCDC163A0A0D9SF12 145 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 FAM155AB1AL88 458 aaPredicted RBP7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 SIGLEC6O43699 453 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 IGLV1-40P01703 118 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 FAM153BP0C7A2 387 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 TAF7LQ5H9L4 462 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 GPAT2Q6NUI2 795 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 C16orf86Q6ZW13 317 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 SLC51AQ86UW1 340 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 ARHGEF39Q8N4T4 335 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 ADCY4Q8NFM4 1077 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 IPO9Q96P70 1041 aaKnown RBP7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 AARSD1Q9BTE6 412 aaKnown RBP7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 DSCC1Q9BVC3 393 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 MKNK2Q9HBH9 465 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 GFOD1Q9NXC2 390 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 SF3B6Q9Y3B4 125 aaKnown RBP7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 EMC9Q9Y3B6 208 aa7.89□□□□□ -1.15
CKS1BP1-201ENST00000555221 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 ITGB2P05107 769 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 FSTP19883 344 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 PPP2R2AP63151 447 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 TNK2Q07912 1038 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 SNW1Q13573 536 aaKnown RBP7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 FIBCD1Q8N539 461 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 CDC6Q99741 560 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 SLKQ9H2G2 1235 aaPredicted RBP7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 NOL6Q9H6R4 1146 aaKnown RBP7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 CHST7Q9NS84 486 aa7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 CGGBP1Q9UFW8 167 aaPredicted RBP7.88□□□□□ -1.15
CKS1BP1-201ENST00000555221 PRR33A8MZF0 331 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 WDR64B1ANS9 1081 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 GRB10Q13322 594 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 TCEA2Q15560 299 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 CLEC16AQ2KHT3 1053 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 TMC3Q7Z5M5 1100 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 TRIM59Q8IWR1 403 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 SHISA5Q8N114 240 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 SHKBP1Q8TBC3 707 aa7.87□□□□□ -1.15
CKS1BP1-201ENST00000555221 BRF1Q92994 677 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms