RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 COL25A1Q9BXS0 654 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-216ENST00000555137 MROH8Q9H579 483 aa11.65□□□□□ -0.54
HNRNPC-216ENST00000555137 PRDM5Q9NQX1 630 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-216ENST00000555137 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.54
HNRNPC-216ENST00000555137 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
HNRNPC-216ENST00000555137 SWAP70Q9UH65 585 aa11.65□□□□□ -0.54
HNRNPC-216ENST00000555137 SPTBN5Q9NRC6 3674 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 PLXNA1Q9UIW2 1896 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 TRIM43BA6NCK2 446 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 PGK2P07205 417 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 IFIT2P09913 472 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 TAL1P17542 331 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 CDK8P49336 464 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 TRIM43Q96BQ3 446 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 LENG1Q96BZ8 264 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 PRKAG2Q9UGJ0 569 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 ADAMTS5Q9UNA0 930 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 MYH7P12883 1935 aa11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-216ENST00000555137 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 USP17L21D6R901 530 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 WDR46O15213 610 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 FCER1AP12319 257 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 ITGB8P26012 769 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 EPHB4P54760 987 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 TLE2Q04725 743 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 ATP8A2Q9NTI2 1148 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 ZBTB40Q9NUA8 1239 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 ZNF214Q9UL59 606 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
HNRNPC-216ENST00000555137 VWA5AO00534 786 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 PGK1P00558 417 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 ATP5JP18859 108 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 ZNF792Q3KQV3 632 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 MMP19Q99542 508 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 HAUS7Q99871 368 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 TTYH1Q9H313 450 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 XPNPEP3Q9NQH7 507 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 SLC5A4Q9NY91 659 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
HNRNPC-216ENST00000555137 SLC25A27O95847 323 aa11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 ZNF865P0CJ78 1059 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 RPAP2Q8IXW5 612 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 TINF2Q9BSI4 451 aa11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 PUS7LQ9H0K6 701 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 SEMA6BQ9H3T3 888 aa11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 PPP1R9AQ9ULJ8 1098 aa11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 SLC4A4Q9Y6R1 1079 aa11.61□□□□□ -0.55
HNRNPC-216ENST00000555137 A0A1W2PQ45 241 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 A0A1W2PQY0 241 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 RAB11FIP3O75154 756 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 ADAMTS4O75173 837 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 RARBP10826 455 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 STAT3P40763 770 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 UBE3CQ15386 1083 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 MYLIPQ8WY64 445 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
HNRNPC-216ENST00000555137 RAD21O60216 631 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 PQBP1O60828 265 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 HMMRO75330 724 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 CLTBP09497 229 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 RASA1P20936 1047 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 SMAD3P84022 425 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 KCTD2Q14681 263 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 MAFAQ8NHW3 353 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 RIPK3Q9Y572 518 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
HNRNPC-216ENST00000555137 MCM3APO60318 1980 aa11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 MYADML2A6NDP7 307 aa11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 ADCY6O43306 1168 aa11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 SMARCA5O60264 1052 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 SNAI1O95863 264 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 AKR1A1P14550 325 aa11.58□□□□□ -0.56
HNRNPC-216ENST00000555137 RNF180Q86T96 592 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms