RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 DEFB129Q9H1M3 183 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 KCNJ14Q9UNX9 436 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 ELP1O95163 1332 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 PITPNM2Q9BZ72 1349 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 PHIPQ8WWQ0 1821 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.4
GABRB3-208ENST00000555094 SMARCA1P28370 1054 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 LMOD1P29536 600 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-208ENST00000555094 CAP2P40123 477 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 DCAF4Q8WV16 495 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-208ENST00000555094 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
GABRB3-208ENST00000555094 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
GABRB3-208ENST00000555094 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 VEGFAP15692 232 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 NPY5RQ15761 445 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 CCDC96Q2M329 555 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 NBPF12Q5TAG4 269 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 MYSM1Q5VVJ2 828 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 ATL3Q6DD88 541 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GPT2Q8TD30 523 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 FTOQ9C0B1 505 aaKnown RBP eCLIP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 PPP2R3BQ9Y5P8 575 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GRIN3BO60391 1043 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 NDUFB10O96000 172 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 XBP1P17861 261 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 KLHL40Q2TBA0 621 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 WWC2Q6AWC2 1192 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 ZNF396Q96N95 335 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 SCAND2PQ9GZW5 306 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-208ENST00000555094 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
GABRB3-208ENST00000555094 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 STXBP3O00186 592 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 ACER1Q8TDN7 264 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 ARHGEF10LQ9HCE6 1279 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 SH3GLB2Q9NR46 395 aa12.52□□□□□ -0.41
GABRB3-208ENST00000555094 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
GABRB3-208ENST00000555094 F5H6K3 240 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 MBD3O95983 291 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 ASNSP08243 561 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 YY1P25490 414 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 KRT2P35908 639 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 ECE1P42892 770 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 UBE2HP62256 183 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 KLRC3Q07444 240 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 NR5A1Q13285 461 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
GABRB3-208ENST00000555094 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 FAM177A1Q8N128 213 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-208ENST00000555094 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 MTMR8Q96EF0 704 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 RRP36Q96EU6 259 aaKnown RBP12.51□□□□□ -0.41
GABRB3-208ENST00000555094 PIGSQ96S52 555 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 BARHL2Q9NY43 387 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 RTEL1Q9NZ71 1219 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 CFAP45Q9UL16 551 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 TMX2Q9Y320 296 aa12.51□□□□□ -0.41
GABRB3-208ENST00000555094 SLC1A4P43007 532 aa12.5□□□□□ -0.41
GABRB3-208ENST00000555094 NASPP49321 788 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-208ENST00000555094 KIAA1755Q5JYT7 1200 aa12.5□□□□□ -0.41
GABRB3-208ENST00000555094 PRAMEF18Q5VWM3 479 aa12.5□□□□□ -0.41
GABRB3-208ENST00000555094 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
GABRB3-208ENST00000555094 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-208ENST00000555094 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
GABRB3-208ENST00000555094 ADGRF4Q8IZF3 695 aa12.5□□□□□ -0.41
GABRB3-208ENST00000555094 NUP88Q99567 741 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms