RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PPT2	Q9UMR5	302 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	ST14	Q9Y5Y6	855 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	CDK13	Q14004	1512 aa	Known RBP	8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	YEATS2	Q9ULM3	1422 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	LRRN2	O75325	713 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	TCF3	P15923	654 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	TMEM40	Q8WWA1	233 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	KREMEN1	Q96MU8	473 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	CNNM2	Q9H8M5	875 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	ATP13A1	Q9HD20	1204 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	SEMA3G	Q9NS98	782 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	GINM1	Q9NU53	330 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	ZNRF3	Q9ULT6	936 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	SNX11	Q9Y5W9	270 aa		8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	DENND4B	O75064	1496 aa	Predicted RBP	8.12	□□□□□ -1.11
PSMC6-208	ENST00000554956	ADAMTSL3	P82987	1691 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	RGS13	O14921	159 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	GBP1	P32455	592 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	KIR3DL1	P43629	444 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	PLCL1	Q15111	1095 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	CDCP2	Q5VXM1	449 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	CCDC81	Q6ZN84	652 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	NLRC3	Q7RTR2	1065 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	GPRASP2	Q96D09	838 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	FERD3L	Q96RJ6	166 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	FANCA	O15360	1455 aa		8.11	□□□□□ -1.11
PSMC6-208	ENST00000554956	FAM86C2P	A6NEL3	165 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	MEIS3P2	A8K0S8	358 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	WASH4P	A8MWX3	477 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	HSPA2	P54652	639 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	IKZF1	Q13422	519 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	FBXW10	Q5XX13	1052 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	DTWD2	Q8NBA8	298 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	RNF141	Q8WVD5	230 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	COX4I2	Q96KJ9	171 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	TGIF2	Q9GZN2	237 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	CCSER2	Q9H7U1	834 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	PRDM7	Q9NQW5	492 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	ADAMTS6	Q9UKP5	1117 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	EFR3B	Q9Y2G0	817 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	ARHGAP35	Q9NRY4	1499 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	TTC37	Q6PGP7	1564 aa		8.1	□□□□□ -1.11
PSMC6-208	ENST00000554956	LMTK3	Q96Q04	1460 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	NME1	P15531	152 aa	Known RBP	8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	FUT4	P22083	530 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	ERCC5	P28715	1186 aa	Predicted RBP	8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	AGBL5	Q8NDL9	886 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	ASB11	Q8WXH4	323 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	ZSWIM5	Q9P217	1185 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	ADGRE2	Q9UHX3	823 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	PLCH2	O75038	1416 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	SCAPER	Q9BY12	1400 aa		8.09	□□□□□ -1.11
PSMC6-208	ENST00000554956	GJA8	P48165	433 aa		8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	ANGEL2	Q5VTE6	544 aa	Known RBP	8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	UBE2F	Q969M7	185 aa		8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	ZNF512B	Q96KM6	892 aa	Predicted RBP	8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	SLC9A7	Q96T83	725 aa		8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	SIGLEC1	Q9BZZ2	1709 aa		8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	EFCAB5	A4FU69	1503 aa		8.08	□□□□□ -1.12
PSMC6-208	ENST00000554956	MADD	Q8WXG6	1647 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	BCORL1	Q5H9F3	1711 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	ACR	P10323	421 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	LRRFIP1	Q32MZ4	808 aa	Known RBP	8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	ZNF792	Q3KQV3	632 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	RUFY4	Q6ZNE9	571 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	AFAP1	Q8N556	730 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	PIWIL2	Q8TC59	973 aa	Known RBP	8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	RASGRP4	Q8TDF6	673 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	VWCE	Q96DN2	955 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	DUSP15	Q9H1R2	295 aa	Predicted RBP	8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	INPP5F	Q9Y2H2	1132 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	ARHGEF40	Q8TER5	1519 aa		8.07	□□□□□ -1.12
PSMC6-208	ENST00000554956	POGZ	Q7Z3K3	1410 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	TNFRSF10C	O14798	259 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	SOX9	P48436	509 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	NASP	P49321	788 aa	Predicted RBP	8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	CEBPA	P49715	358 aa	Predicted RBP	8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	IRAK1	P51617	712 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	CHMP4BP1	P59074	171 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	ZP2	Q05996	745 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	LSR	Q86X29	649 aa	Predicted RBP	8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	TMEM192	Q8IY95	271 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	FBXO41	Q8TF61	875 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	ASPN	Q9BXN1	380 aa		8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	CARS2	Q9HA77	564 aa	Known RBP	8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	MBNL3	Q9NUK0	354 aa	Known RBP	8.06	□□□□□ -1.12
PSMC6-208	ENST00000554956	ZMYM4	Q5VZL5	1548 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	RNASE1	P07998	156 aa	Known RBP	8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	IMPDH2	P12268	514 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	EFCAB2	Q5VUJ9	269 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	THAP5	Q7Z6K1	395 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	SLC6A18	Q96N87	628 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	KCNH3	Q9ULD8	1083 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	RICTOR	Q6R327	1708 aa		8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	PCF11	O94913	1555 aa	Known RBP	8.05	□□□□□ -1.12
PSMC6-208	ENST00000554956	FMN1	Q68DA7	1419 aa		8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	ZFYVE16	Q7Z3T8	1539 aa		8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	HECW1	Q76N89	1606 aa		8.04	□□□□□ -1.12
PSMC6-208	ENST00000554956	SHISA3	A0PJX4	238 aa		8.04	□□□□□ -1.12

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms