RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 COBLO75128 1261 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 HMMRO75330 724 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 CLTBP09497 229 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 FOSL2P15408 326 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 FAM47AQ5JRC9 791 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 PRAMEF19Q5SWL8 479 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMEM253-204ENST00000554844 KIF1BPQ96EK5 621 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 RNPC3Q96LT9 517 aaKnown RBP11.64□□□□□ -0.55
TMEM253-204ENST00000554844 CDX2Q99626 313 aaPredicted RBP11.64□□□□□ -0.55
TMEM253-204ENST00000554844 SEMA6BQ9H3T3 888 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 VCPKMTQ9H867 229 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 GOPCQ9HD26 462 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
TMEM253-204ENST00000554844 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 TMX2Q9Y320 296 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 CTDP1Q9Y5B0 961 aaPredicted RBP11.64□□□□□ -0.55
TMEM253-204ENST00000554844 DNAH12Q6ZR08 3092 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 APBB1O00213 710 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 MS4A1P11836 297 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 AKR1A1P14550 325 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 RAG1P15918 1043 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 SNX17Q15036 470 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 C9orf50Q5SZB4 431 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 LCORLQ8N3X6 602 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 SLC44A5Q8NCS7 719 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 RHPN1Q8TCX5 695 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 ARMT1Q9H993 441 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 PHF24Q9UPV7 400 aa11.63□□□□□ -0.55
TMEM253-204ENST00000554844 TMEM265A0A087WTH1 108 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
TMEM253-204ENST00000554844 MBD4O95243 580 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 CYP2D6P10635 497 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 AKR1B1P15121 316 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 TLE2Q04725 743 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 FPGSQ05932 587 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 CCDC174Q6PII3 467 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 NUP133Q8WUM0 1156 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
TMEM253-204ENST00000554844 DYNLL2Q96FJ2 89 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 TINF2Q9BSI4 451 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 TMEM39AQ9NV64 488 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
TMEM253-204ENST00000554844 DIS3Q9Y2L1 958 aaKnown RBP11.62□□□□□ -0.55
TMEM253-204ENST00000554844 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 DCDC2CA8MYV0 355 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 PGK1P00558 417 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 IGHA2P01877 340 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 STAT3P40763 770 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 CDK8P49336 464 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
TMEM253-204ENST00000554844 TMEM132BQ14DG7 1078 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 ZSCAN25Q6NSZ9 544 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
TMEM253-204ENST00000554844 SPC25Q9HBM1 224 aa11.61□□□□□ -0.55
TMEM253-204ENST00000554844 A0A1W2PQ45 241 aaPredicted RBP11.6□□□□□ -0.55
TMEM253-204ENST00000554844 A0A1W2PQY0 241 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 RAB11FIP3O75154 756 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 PGK2P07205 417 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 RLBP1P12271 317 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 EEF2P13639 858 aaKnown RBP11.6□□□□□ -0.55
TMEM253-204ENST00000554844 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 TSEN34Q9BSV6 310 aaKnown RBP11.6□□□□□ -0.55
TMEM253-204ENST00000554844 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
TMEM253-204ENST00000554844 STARD7Q9NQZ5 370 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 FAM184BQ9ULE4 1060 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 PPP1R9AQ9ULJ8 1098 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 MROH7Q68CQ1 1323 aa11.6□□□□□ -0.55
TMEM253-204ENST00000554844 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 ZNFX1Q9P2E3 1918 aaKnown RBP11.59□□□□□ -0.55
TMEM253-204ENST00000554844 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.59□□□□□ -0.55
TMEM253-204ENST00000554844 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.59□□□□□ -0.55
TMEM253-204ENST00000554844 TCRBV5S4A2TA0A5A2 114 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 USP17L21D6R901 530 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 VWA5AO00534 786 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 KIAA0355O15063 1070 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 PRKAB2O43741 272 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 ADD2P35612 726 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 EVX2Q03828 476 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 ZNF792Q3KQV3 632 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 C12orf60Q5U649 245 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
TMEM253-204ENST00000554844 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
TMEM253-204ENST00000554844 MSL3Q8N5Y2 521 aaKnown RBP11.59□□□□□ -0.55
TMEM253-204ENST00000554844 VTI1AQ96AJ9 217 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms