RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CARS2Q9HA77 564 aaKnown RBP6.41□□□□□ -1.38
SCFD1-214ENST00000554819 PRR13Q9NZ81 148 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 C9IYK1 514 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 RBAK-RBAKDNI3L0D1 243 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 SIGLEC6O43699 453 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 ESR1P03372 595 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 FGRP09769 529 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 ZNF792Q3KQV3 632 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 GNPTABQ3T906 1256 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 MCF2L2Q86YR7 1114 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 ZNF655Q8N720 491 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-214ENST00000554819 PRDM14Q9GZV8 571 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.38
SCFD1-214ENST00000554819 LTBP3Q9NS15 1303 aa6.4□□□□□ -1.39
SCFD1-214ENST00000554819 SHISA3A0PJX4 238 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 WASH4PA8MWX3 477 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 TP53P04637 393 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-214ENST00000554819 LTKP29376 864 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 SLC7A5Q01650 507 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 TCEAL1Q15170 157 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 TDRD10Q5VZ19 366 aaKnown RBP6.39□□□□□ -1.39
SCFD1-214ENST00000554819 FAM169BQ8N8A8 192 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 HDAC8Q9BY41 377 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 CHST7Q9NS84 486 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 MBNL3Q9NUK0 354 aaKnown RBP6.39□□□□□ -1.39
SCFD1-214ENST00000554819 PRKAG3Q9UGI9 489 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 ADGRE2Q9UHX3 823 aa6.39□□□□□ -1.39
SCFD1-214ENST00000554819 SSU72P8A0A1W2PR75 194 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 PRAMEF1O95521 474 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 RNASE1P07998 156 aaKnown RBP6.38□□□□□ -1.39
SCFD1-214ENST00000554819 EGR3Q06889 387 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 SNW1Q13573 536 aaKnown RBP6.38□□□□□ -1.39
SCFD1-214ENST00000554819 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-214ENST00000554819 RNF111Q6ZNA4 994 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 CBLL1Q75N03 491 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 TMC3Q7Z5M5 1100 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 PPFIBP1Q86W92 1011 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 TCTN2Q96GX1 697 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
SCFD1-214ENST00000554819 ACTR10Q9NZ32 417 aa6.38□□□□□ -1.39
SCFD1-214ENST00000554819 R3HCC1Q9Y3T6 440 aaKnown RBP6.38□□□□□ -1.39
SCFD1-214ENST00000554819 BIN1O00499 593 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 SMAD7O15105 426 aaKnown RBP6.37□□□□□ -1.39
SCFD1-214ENST00000554819 CD247P20963 164 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 ETFBP38117 255 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 PCBP3P57721 371 aaKnown RBP6.37□□□□□ -1.39
SCFD1-214ENST00000554819 NOL9Q5SY16 702 aaKnown RBP6.37□□□□□ -1.39
SCFD1-214ENST00000554819 DCAF15Q66K64 600 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 VHLLQ6RSH7 139 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 ALPK1Q96QP1 1244 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 DSCC1Q9BVC3 393 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 ZNF408Q9H9D4 720 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 PRDM7Q9NQW5 492 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 GFOD1Q9NXC2 390 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 PCDHA11Q9Y5I1 949 aa6.37□□□□□ -1.39
SCFD1-214ENST00000554819 A0A087WZG4 1122 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 ITGA4P13612 1032 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 NCAPHQ15003 741 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 HEATR6Q6AI08 1181 aaKnown RBP6.36□□□□□ -1.39
SCFD1-214ENST00000554819 USHBP1Q8N6Y0 703 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 LINC00116Q8NCU8 138 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 DHX38Q92620 1227 aaKnown RBP6.36□□□□□ -1.39
SCFD1-214ENST00000554819 HAUS7Q99871 368 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 GBP3Q9H0R5 595 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 GP6Q9HCN6 339 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 FAM86C1Q9NVL1 165 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 SLAMF8Q9P0V8 285 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 ADAMTS6Q9UKP5 1117 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 PCDHB10Q9UN67 800 aa6.36□□□□□ -1.39
SCFD1-214ENST00000554819 SHOXO15266 292 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 GSNP06396 782 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 NAT2P11245 290 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 ATP2B1P20020 1258 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 ENDOUP21128 410 aaKnown RBP6.35□□□□□ -1.39
SCFD1-214ENST00000554819 GDNFP39905 211 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 FXNQ16595 210 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 CWF19L1Q69YN2 538 aaKnown RBP6.35□□□□□ -1.39
SCFD1-214ENST00000554819 KIAA1211LQ6NV74 962 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 ATG4DQ86TL0 474 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-214ENST00000554819 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 TANGO6Q9C0B7 1094 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 WHRNQ9P202 907 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 TMEM59LQ9UK28 342 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 TCFL5Q9UL49 500 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 SF3B6Q9Y3B4 125 aaKnown RBP6.35□□□□□ -1.39
SCFD1-214ENST00000554819 ZNF451Q9Y4E5 1061 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 FHOD1Q9Y613 1164 aa6.35□□□□□ -1.39
SCFD1-214ENST00000554819 MEIS1O00470 390 aa6.34□□□□□ -1.39
SCFD1-214ENST00000554819 JUNBP17275 347 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-214ENST00000554819 TAL1P17542 331 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-214ENST00000554819 ZNF445P59923 1031 aa6.34□□□□□ -1.39
SCFD1-214ENST00000554819 ADAT2Q7Z6V5 191 aaKnown RBP6.34□□□□□ -1.39
SCFD1-214ENST00000554819 KRTAP1-3Q8IUG1 177 aa6.34□□□□□ -1.39
SCFD1-214ENST00000554819 KLHL6Q8WZ60 621 aa6.34□□□□□ -1.39
SCFD1-214ENST00000554819 DIS3Q9Y2L1 958 aaKnown RBP6.34□□□□□ -1.39
SCFD1-214ENST00000554819 DNAJC25-GNG10A0A024R161 153 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 ANKRD34BA5PLL1 514 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 CBFA2T2O43439 604 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 PPM1BO75688 479 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 STK10O94804 968 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms