RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RNF141Q8WVD5 230 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 RNF34Q969K3 372 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 COX4I2Q96KJ9 171 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 DIRC2Q96SL1 478 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 METTL5Q9NRN9 209 aaKnown RBP2.46□□□□□ -2.02
PRPF39-208ENST00000554785 MINPP1Q9UNW1 487 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 PCDHB14Q9Y5E9 798 aa2.46□□□□□ -2.02
PRPF39-208ENST00000554785 TMEM253P0C7T8 217 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 TNNI2P48788 182 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 FANCCQ00597 558 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 CLCQ05315 142 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 EGR3Q06889 387 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 TMEM67Q5HYA8 995 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 C9orf131Q5VYM1 1079 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 CIAPIN1Q6FI81 312 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 SYDE1Q6ZW31 735 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-208ENST00000554785 PHACTR4Q8IZ21 702 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 CCDC74BQ96LY2 380 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 DUSP13Q9UII6 198 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 GGT7Q9UJ14 662 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 NOTOA8MTQ0 251 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 RGS13O14921 159 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 HPXP02790 462 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 CTSWP56202 376 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 PWP1Q13610 501 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 SEZ6Q53EL9 994 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 OVOS1Q6IE37 1185 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 MPZL3Q6UWV2 235 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 TMC3Q7Z5M5 1100 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 METTL16Q86W50 562 aaKnown RBP2.45□□□□□ -2.02
PRPF39-208ENST00000554785 ABHD4Q8TB40 342 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 MYLIPQ8WY64 445 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF512BQ96KM6 892 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-208ENST00000554785 LRRC3Q9BY71 257 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 RNF32Q9H0A6 362 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 GPATCH2Q9NW75 528 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF281Q9Y2X9 895 aa2.45□□□□□ -2.02
PRPF39-208ENST00000554785 ATE1O95260 518 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 C1QTNF9P0C862 333 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 MED14OSP0DP75 135 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 ERCC5P28715 1186 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 LTKP29376 864 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 GBP1P32455 592 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 TEKQ02763 1124 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 CWF19L2Q2TBE0 894 aaKnown RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 ZPBP2Q6X784 338 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 GK5Q6ZS86 529 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 LCNL1Q6ZST4 164 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 HS2ST1Q7LGA3 356 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 NT5DC4Q86YG4 428 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 TMEM192Q8IY95 271 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 USHBP1Q8N6Y0 703 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 ATG4CQ96DT6 458 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 EAF1Q96JC9 268 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 SLC26A8Q96RN1 970 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 G6PC3Q9BUM1 346 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 TRIT1Q9H3H1 467 aaKnown RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 NSUN3Q9H649 340 aaKnown RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 SUPT16HQ9Y5B9 1047 aaKnown RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 SMARCA2P51531 1590 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 TMEM82A0PJX8 343 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 ACRP10323 421 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 GLDCP23378 1020 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF394Q53GI3 561 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 NBPF12Q5TAG4 269 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-208ENST00000554785 CDCP2Q5VXM1 449 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 SHISA4Q96DD7 197 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 HDAC8Q9BY41 377 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 EHMT1Q9H9B1 1298 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 GMIPQ9P107 970 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 KCNH3Q9ULD8 1083 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 PCDHGB7Q9Y5F8 929 aa2.44□□□□□ -2.02
PRPF39-208ENST00000554785 ADAMTS20P59510 1910 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 FAM86C2PA6NEL3 165 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 TCAF2A6NFQ2 919 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 RAG1P15918 1043 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 RAD51AP2Q09MP3 1159 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 NMIQ13287 307 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-208ENST00000554785 KIR3DS1Q14943 382 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 NBPF9Q3BBW0 867 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 USP48Q86UV5 1035 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 PDZD8Q8NEN9 1154 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 LINC01599Q8WXQ3 324 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 RELTQ969Z4 430 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 ASPNQ9BXN1 380 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 TGIF2Q9GZN2 237 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 CNNM2Q9H8M5 875 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 DDX41Q9UJV9 622 aaKnown RBP2.43□□□□□ -2.02
PRPF39-208ENST00000554785 NESP48681 1621 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 CUX2O14529 1486 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 ROBO2Q9HCK4 1378 aa2.43□□□□□ -2.02
PRPF39-208ENST00000554785 MYOCOSA0A1B0GUC4 107 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 ETV2O00321 342 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 PRAMEF1O95521 474 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 RAC2P15153 192 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SDHBP21912 280 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 MCM4P33991 863 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 CTSKP43235 329 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 CEBPAP49715 358 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 RACK1P63244 317 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms