RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 DSCC1Q9BVC3 393 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 COL25A1Q9BXS0 654 aaPredicted RBP7□□□□□ -1.29
ATXN3-230ENST00000554673 LRRC2Q9BYS8 371 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 AGXT2Q9BYV1 514 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 ANKRD2Q9GZV1 360 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 DBNDD1Q9H9R9 158 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 DDX4Q9NQI0 724 aaKnown RBP7□□□□□ -1.29
ATXN3-230ENST00000554673 MAP10Q9P2G4 905 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 TPCN1Q9ULQ1 816 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 BAZ2BQ9UIF8 2168 aaKnown RBP7□□□□□ -1.29
ATXN3-230ENST00000554673 GAKO14976 1311 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 OTOFQ9HC10 1997 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 FIGNL2A6NMB9 653 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L5A8MUK1 530 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 REC8O95072 547 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 CTDNEP1O95476 244 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 EGFRP00533 1210 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 PDE6BP35913 854 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 JAG1P78504 1218 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 ME3Q16798 604 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 AOC3Q16853 763 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 CRTC2Q53ET0 693 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-230ENST00000554673 RASGRP2Q7LDG7 609 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 CHST3Q7LGC8 479 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 MEIOBQ8N635 442 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 SREK1Q8WXA9 508 aaKnown RBP6.99□□□□□ -1.29
ATXN3-230ENST00000554673 ZNF622Q969S3 477 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATXN3-230ENST00000554673 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 TMX3Q96JJ7 454 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 JAKMIP1Q96N16 626 aaKnown RBP6.99□□□□□ -1.29
ATXN3-230ENST00000554673 MTFR1LQ9H019 292 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 GGA1Q9UJY5 639 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 BRPF3Q9ULD4 1205 aa6.99□□□□□ -1.29
ATXN3-230ENST00000554673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATXN3-230ENST00000554673 E7EWF7 191 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 ADAMTS3O15072 1205 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 EPB41L2O43491 1005 aaKnown RBP6.98□□□□□ -1.29
ATXN3-230ENST00000554673 FBXO45P0C2W1 286 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 CYP7A1P22680 504 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 RPS6KB1P23443 525 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 NEK4P51957 841 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 ANAPC15P60006 121 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 PTK7Q13308 1070 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 RRP1BQ14684 758 aaKnown RBP6.98□□□□□ -1.29
ATXN3-230ENST00000554673 RABEP1Q15276 862 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 ALX1Q15699 326 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 GORABQ5T7V8 394 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 NOL8Q76FK4 1167 aaKnown RBP6.98□□□□□ -1.29
ATXN3-230ENST00000554673 SH3BP5LQ7L8J4 393 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 IFNL3Q8IZI9 196 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 NECAB1Q8N987 351 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 SLC44A5Q8NCS7 719 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 SH3RF3Q8TEJ3 882 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-230ENST00000554673 DRC1Q96MC2 740 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 TM6SF1Q9BZW5 370 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 ZNF277Q9NRM2 450 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-230ENST00000554673 ANKIB1Q9P2G1 1089 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 PGAP2Q9UHJ9 254 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
ATXN3-230ENST00000554673 ANKRD33BA6NCL7 494 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 K7ELQ4 463 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 WDHD1O75717 1129 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 FGRP09769 529 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 YBX3P16989 372 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 FSHRP23945 695 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 GRM5P41594 1212 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 GTF2IP78347 998 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 PTSQ03393 145 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 KIAA2012Q0VF49 1180 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ZNF385CQ66K41 422 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 APOBEC3HQ6NTF7 200 aaKnown RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 CTR9Q6PD62 1173 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 C1orf216Q8TAB5 229 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ZBED3Q96IU2 234 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 DNAJC18Q9H819 358 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 DCP1AQ9NPI6 582 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ABCF2Q9UG63 623 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 RLFQ13129 1914 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ASTN2O75129 1339 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ZMYM6O95789 1325 aa6.97□□□□□ -1.29
ATXN3-230ENST00000554673 ATRNL1Q5VV63 1379 aa6.96□□□□□ -1.29
ATXN3-230ENST00000554673 WDR90Q96KV7 1748 aa6.96□□□□□ -1.29
ATXN3-230ENST00000554673 PTPRFP10586 1907 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 GPR75-ASB3A0A0A6YYF3 556 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 H0YIN7 160 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 ECE2O60344 883 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 JAK2O60674 1132 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 SKIP12755 728 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 CASTP20810 708 aaKnown RBP6.96□□□□□ -1.3
ATXN3-230ENST00000554673 ANP32AP39687 249 aaKnown RBP6.96□□□□□ -1.3
ATXN3-230ENST00000554673 SCNN1DP51172 638 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 PLCD1P51178 756 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 NFIAQ12857 509 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 SLC4A8Q2Y0W8 1093 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 C4orf48Q5BLP8 95 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 RCSD1Q6JBY9 416 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms