RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TSPY8P0CW00 308 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-213ENST00000554508 MFAP1P55081 439 aaKnown RBP10.37□□□□□ -0.75
ACTN1-213ENST00000554508 GRB14Q14449 540 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 MAP3K21Q5TCX8 1036 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 CCDC129Q6ZRS4 1044 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 ATG4CQ96DT6 458 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 HTATIP2Q9BUP3 242 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 MOV10L1Q9BXT6 1211 aaKnown RBP10.37□□□□□ -0.75
ACTN1-213ENST00000554508 MTMR4Q9NYA4 1195 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 CLIP2Q9UDT6 1046 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 ZNF236Q9UL36 1845 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 PLXNA1Q9UIW2 1896 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 F5H6K3 240 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 RAD21O60216 631 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 FARP2O94887 1054 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-213ENST00000554508 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
ACTN1-213ENST00000554508 ERCC3P19447 782 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 COPB2P35606 906 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 TFAP4Q01664 338 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 KLRC3Q07444 240 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 TRIM32Q13049 653 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 NMIQ13287 307 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-213ENST00000554508 PLS1Q14651 629 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 MFSD14CQ5VZR4 134 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 DPP9Q86TI2 863 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 CEP95Q96GE4 821 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 SLC5A4Q9NY91 659 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 PPP1R9AQ9ULJ8 1098 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 CEP290O15078 2479 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 PLIN4Q96Q06 1357 aa10.36□□□□□ -0.75
ACTN1-213ENST00000554508 ZMYM6O95789 1325 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 SMCHD1A6NHR9 2005 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 A0A0D9SFI3 127 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 HIP1O00291 1037 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 VWA5AO00534 786 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 FOXP2O15409 715 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 NDUFB10O96000 172 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 FGAP02671 866 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 FGRP09769 529 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 HSPD1P10809 573 aaKnown RBP10.35□□□□□ -0.75
ACTN1-213ENST00000554508 SDSP20132 328 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 CACNB2Q08289 660 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-213ENST00000554508 TMEM132BQ14DG7 1078 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 CCL14Q16627 93 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-213ENST00000554508 NCAPG2Q86XI2 1143 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 RIOX2Q8IUF8 465 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 PRPF38AQ8NAV1 312 aaKnown RBP10.35□□□□□ -0.75
ACTN1-213ENST00000554508 GMCL1P1Q8NEA9 526 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 DPF3Q92784 378 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 SLF1Q9BQI6 1058 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 FBXO28Q9NVF7 368 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 FEM1BQ9UK73 627 aa10.35□□□□□ -0.75
ACTN1-213ENST00000554508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
ACTN1-213ENST00000554508 CCDC171Q6TFL3 1326 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 TSPY2A6NKD2 308 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 ORC4O43929 436 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 FDX1P10109 184 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 FCER1AP12319 257 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 ADORA2AP29274 412 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 STAT3P40763 770 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 OLFML2BQ68BL8 750 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 NECAB2Q7Z6G3 386 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 NPLOC4Q8TAT6 608 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 OGDHLQ9ULD0 1010 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 FRMPD3Q5JV73 1810 aa10.34□□□□□ -0.75
ACTN1-213ENST00000554508 ATP2A1O14983 1001 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 RANBP6O60518 1105 aaKnown RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 MSCO60682 206 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 ZBED4O75132 1171 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 PCP11498 1178 aaKnown RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 BMP3P12645 472 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 CCND3P30281 292 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 SLFN13Q68D06 897 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 ZNF589Q86UQ0 364 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 REPS2Q8NFH8 660 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 PAWRQ96IZ0 340 aaKnown RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 NUP88Q99567 741 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 DIAPH3Q9NSV4 1193 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 FLRT1Q9NZU1 646 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 ZNF214Q9UL59 606 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 CTDP1Q9Y5B0 961 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-213ENST00000554508 NR2E3Q9Y5X4 410 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 ALPK3Q96L96 1907 aa10.33□□□□□ -0.76
ACTN1-213ENST00000554508 PLA2G6O60733 806 aa10.32□□□□□ -0.76
ACTN1-213ENST00000554508 COBLO75128 1261 aa10.32□□□□□ -0.76
ACTN1-213ENST00000554508 IGHA2P01877 340 aa10.32□□□□□ -0.76
ACTN1-213ENST00000554508 NT5C2P49902 561 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms