RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PSMD2Q13200 908 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 FAM196AQ6ZSG2 479 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 MAP4K3Q8IVH8 894 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 MRRFQ96E11 262 aaKnown RBP8.1□□□□□ -1.11
SCFD1-212ENST00000554486 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
SCFD1-212ENST00000554486 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 FURINP09958 794 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 SELPP16109 830 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.11
SCFD1-212ENST00000554486 FCGRTP55899 365 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 EIF4A1P60842 406 aaKnown RBP8.09□□□□□ -1.11
SCFD1-212ENST00000554486 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
SCFD1-212ENST00000554486 DOC2BQ14184 412 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 ZNF790Q6PG37 636 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 TSPYL6Q8N831 410 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 C8orf58Q8NAV2 365 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-212ENST00000554486 ATG3Q9NT62 314 aa8.09□□□□□ -1.11
SCFD1-212ENST00000554486 HEG1Q9ULI3 1381 aa8.09□□□□□ -1.12
SCFD1-212ENST00000554486 C5P01031 1676 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 SORBS3O60504 671 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 USP17L7P0C7H9 530 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
SCFD1-212ENST00000554486 VAMP1P23763 118 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 ADGRE1Q14246 886 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 HGSNATQ68CP4 663 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 ZNF496Q96IT1 587 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-212ENST00000554486 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 ZNF576Q9H609 170 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 FAM8A1Q9UBU6 413 aa8.08□□□□□ -1.12
SCFD1-212ENST00000554486 VAMP4O75379 141 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 TRIM37O94972 964 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 RECKO95980 971 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 PTPRAP18433 802 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 CDC27P30260 824 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 FAAP100Q0VG06 881 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 ZNF423Q2M1K9 1284 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 TXNRD3Q86VQ6 643 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
SCFD1-212ENST00000554486 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
SCFD1-212ENST00000554486 PRAMEF22A3QJZ6 481 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 ELL2O00472 640 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-212ENST00000554486 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
SCFD1-212ENST00000554486 MBTPS1Q14703 1052 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 TWISTNBQ3B726 338 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-212ENST00000554486 MEI1Q5TIA1 1274 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 TTC5Q8N0Z6 440 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 BACH2Q9BYV9 841 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 LY75O60449 1722 aa8.06□□□□□ -1.12
SCFD1-212ENST00000554486 LAMB4A4D0S4 1761 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 CACNA1FO60840 1977 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 DEAF1O75398 565 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-212ENST00000554486 CENPBP07199 599 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-212ENST00000554486 CT47B1P0C2W7 299 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-212ENST00000554486 GSTT1P30711 240 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 SMARCC1Q92922 1105 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-212ENST00000554486 TJP1Q07157 1748 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 PALLDQ8WX93 1383 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 ZNF831Q5JPB2 1677 aa8.05□□□□□ -1.12
SCFD1-212ENST00000554486 SOS1Q07889 1333 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 CICQ96RK0 1608 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 LINC01387J3KSC0 135 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 HOXB7P09629 217 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 SNRPA1P09661 255 aaKnown RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 ESRRAP11474 423 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 RARSP54136 660 aaKnown RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 DNAJC10Q8IXB1 793 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 MRPL18Q9H0U6 180 aaKnown RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 TPSG1Q9NRR2 321 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 VTI1BQ9UEU0 232 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 RCAN3Q9UKA8 241 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 USP16Q9Y5T5 823 aa8.04□□□□□ -1.12
SCFD1-212ENST00000554486 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
SCFD1-212ENST00000554486 TAF1LQ8IZX4 1826 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 DLL1O00548 723 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 TCERG1O14776 1098 aaKnown RBP8.03□□□□□ -1.12
SCFD1-212ENST00000554486 BCAR3O75815 825 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 XRCC5P13010 732 aaKnown RBP8.03□□□□□ -1.12
SCFD1-212ENST00000554486 EIF2S2P20042 333 aaKnown RBP8.03□□□□□ -1.12
SCFD1-212ENST00000554486 CDC25BP30305 580 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 ITPK1Q13572 414 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 GALNT11Q8NCW6 608 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 SSH1Q8WYL5 1049 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 CRELD1Q96HD1 420 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 CLEC4MQ9H2X3 399 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-212ENST00000554486 SEMA6BQ9H3T3 888 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
SCFD1-212ENST00000554486 AKAP2Q9Y2D5 859 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms