RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 SDE2Q6IQ49 451 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 ZNF662Q6ZS27 426 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 TMC3Q7Z5M5 1100 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 C7orf61Q8IZ16 206 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
CHD8-207ENST00000554384 SH3TC2Q8TF17 1288 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 PPP1R14AQ96A00 147 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 PRDM14Q9GZV8 571 aa7.66□□□□□ -1.18
CHD8-207ENST00000554384 PRDM5Q9NQX1 630 aaPredicted RBP7.66□□□□□ -1.18
CHD8-207ENST00000554384 ANKRD34BA5PLL1 514 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 WDR64B1ANS9 1081 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 TBX1O43435 398 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 FAM153BP0C7A2 387 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 CD247P20963 164 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 ZNF445P59923 1031 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 SFRP5Q5T4F7 317 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 SHKBP1Q8TBC3 707 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 FBXL18Q96ME1 805 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 APBA2Q99767 749 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 GP6Q9HCN6 339 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 GFOD1Q9NXC2 390 aa7.65□□□□□ -1.18
CHD8-207ENST00000554384 ESYT3A0FGR9 886 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 SHISA3A0PJX4 238 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 WASH4PA8MWX3 477 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 MEIS1O00470 390 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 RNF4P78317 190 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 NFIAQ12857 509 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 SQSTM1Q13501 440 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 ST13P5Q8NFI4 369 aaPredicted RBP7.64□□□□□ -1.19
CHD8-207ENST00000554384 GIMAP7Q8NHV1 300 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 ASPNQ9BXN1 380 aa7.64□□□□□ -1.19
CHD8-207ENST00000554384 A0A1W2PQU0 124 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 ITGAVP06756 1048 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 ITIH2P19823 946 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 FSTP19883 344 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 PPP2R5DQ14738 602 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 ANKRD39Q53RE8 183 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 YOD1Q5VVQ6 348 aaPredicted RBP7.63□□□□□ -1.19
CHD8-207ENST00000554384 FOXB2Q5VYV0 432 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 DTWD2Q8NBA8 298 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 LRRN4CLQ8ND94 238 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 SMARCC1Q92922 1105 aaPredicted RBP7.63□□□□□ -1.19
CHD8-207ENST00000554384 SPATA9Q9BWV2 254 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 LRRC4CQ9HCJ2 640 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 RNF112Q9ULX5 631 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 SUGT1Q9Y2Z0 365 aa7.63□□□□□ -1.19
CHD8-207ENST00000554384 ADCY3O60266 1144 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 CYP7A1P22680 504 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 GRIA2P42262 883 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 TNK2Q07912 1038 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 FANCLQ9NW38 375 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 LRP2BPQ9P2M1 347 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 PCDHB12Q9Y5F1 795 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 CAPN6Q9Y6Q1 641 aa7.62□□□□□ -1.19
CHD8-207ENST00000554384 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 OXCT1P55809 520 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 CYP27C1Q4G0S4 372 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 NOL9Q5SY16 702 aaKnown RBP7.61□□□□□ -1.19
CHD8-207ENST00000554384 CDKAL1Q5VV42 579 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 DUSP27Q5VZP5 1158 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 ZNF227Q86WZ6 799 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 DBNDD2Q9BQY9 259 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 NOL6Q9H6R4 1146 aaKnown RBP7.61□□□□□ -1.19
CHD8-207ENST00000554384 GTF2IRD1Q9UHL9 959 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 PTCH2Q9Y6C5 1203 aa7.61□□□□□ -1.19
CHD8-207ENST00000554384 PPM1BO75688 479 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 PRAMEF1O95521 474 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 L1CAMP32004 1257 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 NKPD1Q17RQ9 610 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 FIBCD1Q8N539 461 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 ZDHHC15Q96MV8 337 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 OSBPL1AQ9BXW6 950 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 GBP3Q9H0R5 595 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 ARHGEF4Q9NR80 690 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 WHRNQ9P202 907 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 PLAGL2Q9UPG8 496 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 AKT3Q9Y243 479 aa7.6□□□□□ -1.19
CHD8-207ENST00000554384 FAM155AB1AL88 458 aaPredicted RBP7.59□□□□□ -1.19
CHD8-207ENST00000554384 IGF2BP3O00425 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
CHD8-207ENST00000554384 VAMP4O75379 141 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 ITGA4P13612 1032 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 PPP2R2AP63151 447 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
CHD8-207ENST00000554384 SF1Q15637 639 aaKnown RBP7.59□□□□□ -1.19
CHD8-207ENST00000554384 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 C2orf27AQ580R0 203 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 EGFLAMQ63HQ2 1017 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 MFSD4AQ8N468 514 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 JMYQ8N9B5 988 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 BVESQ8NE79 360 aa7.59□□□□□ -1.19
CHD8-207ENST00000554384 THAP3Q8WTV1 239 aaPredicted RBP7.59□□□□□ -1.19
CHD8-207ENST00000554384 DUSP15Q9H1R2 295 aaPredicted RBP7.59□□□□□ -1.19
CHD8-207ENST00000554384 CGGBP1Q9UFW8 167 aaPredicted RBP7.59□□□□□ -1.19
CHD8-207ENST00000554384 GNAT3A8MTJ3 354 aa7.58□□□□□ -1.2
CHD8-207ENST00000554384 H0Y8X5 98 aa7.58□□□□□ -1.2
CHD8-207ENST00000554384 PPP1R12AO14974 1030 aaPredicted RBP7.58□□□□□ -1.2
CHD8-207ENST00000554384 KCNH1O95259 989 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms