RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 LNPKQ9C0E8 428 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 CNNM2Q9H8M5 875 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 CLSPNQ9HAW4 1339 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 SAMD9LQ8IVG5 1584 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 UHRF1BP1Q6BDS2 1440 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 FAM95CA0A1B0GW59 222 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 U2SURPO15042 1029 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 DHX15O43143 795 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 SMARCA5O60264 1052 aaPredicted RBP7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 CST3P01034 146 aaPredicted RBP7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 POLR2BP30876 1174 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 HNRNPMP52272 730 aaKnown RBP eCLIP7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 MAP7Q14244 749 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 BEND4Q6ZU67 534 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 TTC6Q86TZ1 520 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 UBE2Q2Q8WVN8 375 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 KIF2CQ99661 725 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 TNKS2Q9H2K2 1166 aa7.13□□□□□ -1.27
MTHFD1-206ENST00000554353 GPATCH8Q9UKJ3 1502 aaKnown RBP7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 A0A1W2PQH9 124 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 DYNC1LI2O43237 492 aaPredicted RBP7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 KLF4O43474 513 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 GATA4P43694 442 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 CCDC144BQ3MJ40 725 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 SLFN12Q8IYM2 578 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 EZH1Q92800 747 aaPredicted RBP7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 TP53INP1Q96A56 240 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 SLC9A7Q96T83 725 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 ST7Q9NRC1 585 aa7.12□□□□□ -1.27
MTHFD1-206ENST00000554353 AGLP35573 1532 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 SPAG9O60271 1321 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 PPM1GO15355 546 aaPredicted RBP7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 LRIG2O94898 1065 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 ACRP10323 421 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 GBP1P32455 592 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 CAP2P40123 477 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 CHMP4BP1P59074 171 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 CDK5R2Q13319 367 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 RAB33AQ14088 237 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 ZYXQ15942 572 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 UNC5AQ6ZN44 842 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 C19orf47Q8N9M1 422 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 BAHD1Q8TBE0 780 aaPredicted RBP7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 CCDC74BQ96LY2 380 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 OSBPL2Q9H1P3 480 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 SYCP2Q9BX26 1530 aa7.11□□□□□ -1.27
MTHFD1-206ENST00000554353 MROH2AA6NES4 1674 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 CLTCQ00610 1675 aaKnown RBP7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 TNFRSF10CO14798 259 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 CASP7P55210 303 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 NBPF6Q5VWK0 638 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 TAB3Q8N5C8 712 aaPredicted RBP7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 MFSD2AQ8NA29 543 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 CYB5D2Q8WUJ1 264 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 NBPF4Q96M43 638 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 MIPEPQ99797 713 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 ZSWIM4Q9H7M6 989 aa7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 CFDP1Q9UEE9 299 aaPredicted RBP7.1□□□□□ -1.27
MTHFD1-206ENST00000554353 K7ELQ4 463 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 RGS13O14921 159 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 BMS1Q14692 1282 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 FXNQ16595 210 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 CLEC10AQ8IUN9 316 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 TOP6BLQ8N6T0 577 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 CELF2-AS1Q8N7Q2 184 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 ATP7AQ04656 1500 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 ADGBQ8N7X0 1667 aa7.09□□□□□ -1.27
MTHFD1-206ENST00000554353 CNTLNQ9NXG0 1405 aa7.09□□□□□ -1.28
MTHFD1-206ENST00000554353 KIAA1107Q9UPP5 1409 aa7.09□□□□□ -1.28
MTHFD1-206ENST00000554353 ZMYM3Q14202 1370 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 MTUS2Q5JR59 1369 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 LTBP3Q9NS15 1303 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 DDAH1O94760 285 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 LETMD1Q6P1Q0 360 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 C1GALT1Q9NS00 363 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 SIRPGQ9P1W8 387 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 STOML1Q9UBI4 398 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 PCDHB10Q9UN67 800 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 SLC12A7Q9Y666 1083 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 PLEKHH2Q8IVE3 1493 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 INO80Q9ULG1 1556 aaPredicted RBP7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 RAB3GAP2Q9H2M9 1393 aa7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.08□□□□□ -1.28
MTHFD1-206ENST00000554353 ZNF644Q9H582 1327 aaPredicted RBP7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 HMX2A2RU54 273 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 UBOX5O94941 541 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 SLITRK5O94991 958 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 SERINC3Q13530 473 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 DDR2Q16832 855 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 GGT6Q6P531 493 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 SEZ6L2Q6UXD5 910 aa7.07□□□□□ -1.28
MTHFD1-206ENST00000554353 CDH24Q86UP0 819 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms