RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
PTPN21-205ENST00000554270 SASH3O75995 380 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 MORC3Q14149 939 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
PTPN21-205ENST00000554270 HSD3B7Q9H2F3 369 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
PTPN21-205ENST00000554270 C5P01031 1676 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 GNPATO15228 680 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 CHP1Q99653 195 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 MYO1BO43795 1136 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 MECOMQ03112 1051 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 CCDC70Q6NSX1 233 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 RASGRP2Q7LDG7 609 aa12.88□□□□□ -0.35
PTPN21-205ENST00000554270 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 PICALMQ13492 652 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 KRT31Q15323 416 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 TTC19Q6DKK2 380 aaPredicted RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 ADGRG1Q9Y653 693 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 TUBB4AP04350 444 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 RPS8P62241 208 aaKnown RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 SRBD1Q8N5C6 995 aaKnown RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 TUBGCP6Q96RT7 1819 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 STAG2Q8N3U4 1231 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 SMARCC1Q92922 1105 aaPredicted RBP12.87□□□□□ -0.35
PTPN21-205ENST00000554270 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 CDC23Q9UJX2 597 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 ADAM21Q9UKJ8 722 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 ABCC12Q96J65 1359 aa12.87□□□□□ -0.35
PTPN21-205ENST00000554270 FGFR2P21802 821 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 SPA17Q15506 151 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 DYMQ7RTS9 669 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 HDXQ7Z353 690 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 RNF26Q9BY78 433 aaPredicted RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 MRFAP1Q9Y605 127 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 AKR1B10O60218 316 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 RAD51AP2Q09MP3 1159 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 FAM107BQ9H098 131 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 MARF1Q9Y4F3 1742 aaKnown RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 TBC1D8O95759 1140 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 SCG2P13521 617 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 CXCR5P32302 372 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 COPB1P53618 953 aaKnown RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 NAPAP54920 295 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 FAM84BQ96KN1 310 aaPredicted RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
PTPN21-205ENST00000554270 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
PTPN21-205ENST00000554270 B4DLN1 442 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 FANCGO15287 622 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
PTPN21-205ENST00000554270 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 NGLY1Q96IV0 654 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 PSMA7O14818 248 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 KIF5BP33176 963 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 CYP26C1Q6V0L0 522 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 HPS3Q969F9 1004 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 G3V3G9 751 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 MFAP3LO75121 409 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 PDE4DQ08499 809 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 ALX1Q15699 326 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
PTPN21-205ENST00000554270 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
PTPN21-205ENST00000554270 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
PTPN21-205ENST00000554270 TRIM66O15016 1216 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 ADAMTS3O15072 1205 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 VSNL1P62760 191 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 MYO6Q9UM54 1294 aa12.85□□□□□ -0.35
PTPN21-205ENST00000554270 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
PTPN21-205ENST00000554270 CCDC93Q567U6 631 aa12.84□□□□□ -0.35
PTPN21-205ENST00000554270 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
PTPN21-205ENST00000554270 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms