RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C20orf194Q5TEA3 1177 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 C9orf131Q5VYM1 1079 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 FRAT1Q92837 279 aaPredicted RBP7.33□□□□□ -1.24
VPS33B-203ENST00000554264 ZNF428Q96B54 188 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 PNNQ9H307 717 aaKnown RBP7.33□□□□□ -1.24
VPS33B-203ENST00000554264 APAF1O14727 1248 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 GADD45BO75293 160 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-203ENST00000554264 DPEP1P16444 411 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 ITPK1Q13572 414 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 ZNF423Q2M1K9 1284 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 FOXD4L6Q3SYB3 417 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-203ENST00000554264 FOXD4L3Q6VB84 417 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-203ENST00000554264 IFNL2Q8IZJ0 200 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 LENG1Q96BZ8 264 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-203ENST00000554264 ABCB6Q9NP58 842 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 ASAP1Q9ULH1 1129 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 NCAPD2Q15021 1401 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 PKD1L3Q7Z443 1732 aa7.32□□□□□ -1.24
VPS33B-203ENST00000554264 IL16Q14005 1332 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 H3BRJ5 948 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 ADAM11O75078 769 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 PROCP04070 461 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 RFC4P35249 363 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 RGS3P49796 1198 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 TAGLNQ01995 201 aaKnown RBP7.31□□□□□ -1.24
VPS33B-203ENST00000554264 GPAT2Q6NUI2 795 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 NXPE4Q6UWF7 544 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 TBC1D32Q96NH3 1257 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 BCO2Q9BYV7 579 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 OSBPL7Q9BZF2 842 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 ATG3Q9NT62 314 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 PIM2Q9P1W9 311 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 ITGB4P16144 1822 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 KIF13BQ9NQT8 1826 aa7.31□□□□□ -1.24
VPS33B-203ENST00000554264 KIAA1551Q9HCM1 1747 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 MAP2P11137 1827 aaKnown RBP7.3□□□□□ -1.24
VPS33B-203ENST00000554264 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 ALX3O95076 343 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 WISP1O95388 367 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-203ENST00000554264 GYS1P13807 737 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 PHKG2P15735 406 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 HTRA3P83110 453 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 ADGRE1Q14246 886 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 DALRD3Q5D0E6 543 aaKnown RBP7.3□□□□□ -1.24
VPS33B-203ENST00000554264 PRPF40BQ6NWY9 871 aaKnown RBP7.3□□□□□ -1.24
VPS33B-203ENST00000554264 IGF2-ASQ6U949 168 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 FOXD4L4Q8WXT5 416 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-203ENST00000554264 SLC7A3Q8WY07 619 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 SPOCK3Q9BQ16 436 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 RNF181Q9P0P0 153 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 KCPQ6ZWJ8 1503 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 KDRP35968 1356 aa7.3□□□□□ -1.24
VPS33B-203ENST00000554264 CNTNAP4Q9C0A0 1308 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 N4BP2Q86UW6 1770 aaPredicted RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 C9orf172C9J069 976 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 FRAT2O75474 233 aaPredicted RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 RPS6KA4O75676 772 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 LDHBP07195 334 aaKnown RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 KCNA3P22001 575 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 ITPKAP23677 461 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 CD68P34810 354 aaPredicted RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 RARSP54136 660 aaKnown RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 HDAC1Q13547 482 aaPredicted RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 IKBKEQ14164 716 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 MBTPS1Q14703 1052 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 GLIPR1L2Q4G1C9 344 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 ZKSCAN2Q63HK3 967 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 FBXO33Q7Z6M2 555 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 MORC1Q86VD1 984 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 MAP4K3Q8IVH8 894 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 ZNF576Q9H609 170 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 SRA1Q9HD15 236 aaKnown RBP7.29□□□□□ -1.24
VPS33B-203ENST00000554264 SEC31BQ9NQW1 1179 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 CHMP5Q9NZZ3 219 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 DDX19BQ9UMR2 479 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 C4AP0C0L4 1744 aa7.29□□□□□ -1.24
VPS33B-203ENST00000554264 ERVV-2B6SEH9 535 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 IPO8O15397 1037 aaKnown RBP7.28□□□□□ -1.24
VPS33B-203ENST00000554264 HSP90AB1P08238 724 aaKnown RBP7.28□□□□□ -1.24
VPS33B-203ENST00000554264 CABP4P57796 275 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 PCDH1Q08174 1060 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 FAAP100Q0VG06 881 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 MVPQ14764 893 aaKnown RBP7.28□□□□□ -1.24
VPS33B-203ENST00000554264 SKOR2Q2VWA4 1001 aaPredicted RBP7.28□□□□□ -1.24
VPS33B-203ENST00000554264 KLHL23Q8NBE8 558 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 FBF1Q8TES7 1133 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 CLEC4MQ9H2X3 399 aaPredicted RBP7.28□□□□□ -1.24
VPS33B-203ENST00000554264 ANTXR1Q9H6X2 564 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 OSGEPQ9NPF4 335 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 ZNF831Q5JPB2 1677 aa7.28□□□□□ -1.24
VPS33B-203ENST00000554264 TNRC6CQ9HCJ0 1690 aaKnown RBP7.28□□□□□ -1.24
VPS33B-203ENST00000554264 GOLGA6L3A6NEY3 463 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 BCAR3O75815 825 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 HSPA1AP0DMV8 641 aaKnown RBP7.27□□□□□ -1.25
VPS33B-203ENST00000554264 HSPA1BP0DMV9 641 aaKnown RBP7.27□□□□□ -1.25
VPS33B-203ENST00000554264 VEGFAP15692 232 aaPredicted RBP7.27□□□□□ -1.25
VPS33B-203ENST00000554264 NOS3P29474 1203 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms