RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 MS4A1P11836 297 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 C1orf53Q5VUE5 145 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 TMEM179Q6ZVK1 233 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 REPS2Q8NFH8 660 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.99□□□□□ -0.17
TUBB3-204ENST00000554116 FERMT2Q96AC1 680 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-204ENST00000554116 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.99□□□□□ -0.17
TUBB3-204ENST00000554116 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
TUBB3-204ENST00000554116 VCPKMTQ9H867 229 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 RCAN3Q9UKA8 241 aa13.99□□□□□ -0.17
TUBB3-204ENST00000554116 TLE2Q04725 743 aa13.98□□□□□ -0.17
TUBB3-204ENST00000554116 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
TUBB3-204ENST00000554116 ERC1Q8IUD2 1116 aa13.98□□□□□ -0.17
TUBB3-204ENST00000554116 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
TUBB3-204ENST00000554116 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
TUBB3-204ENST00000554116 MROH8Q9H579 483 aa13.98□□□□□ -0.17
TUBB3-204ENST00000554116 MYH7P12883 1935 aa13.98□□□□□ -0.17
TUBB3-204ENST00000554116 FLOT1O75955 427 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 PGK2P07205 417 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 ZNF865P0CJ78 1059 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-204ENST00000554116 ADD2P35612 726 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 CDK8P49336 464 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-204ENST00000554116 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 NCAPG2Q86XI2 1143 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 DNAJC2Q99543 621 aaKnown RBP13.97□□□□□ -0.17
TUBB3-204ENST00000554116 PHF24Q9UPV7 400 aa13.97□□□□□ -0.17
TUBB3-204ENST00000554116 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
TUBB3-204ENST00000554116 MBD4O95243 580 aa13.96□□□□□ -0.17
TUBB3-204ENST00000554116 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.17
TUBB3-204ENST00000554116 ICA1Q05084 483 aa13.96□□□□□ -0.17
TUBB3-204ENST00000554116 PLS1Q14651 629 aa13.96□□□□□ -0.17
TUBB3-204ENST00000554116 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
TUBB3-204ENST00000554116 PRDM5Q9NQX1 630 aaPredicted RBP13.96□□□□□ -0.17
TUBB3-204ENST00000554116 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
TUBB3-204ENST00000554116 ZNF214Q9UL59 606 aaPredicted RBP13.96□□□□□ -0.17
TUBB3-204ENST00000554116 MCM3APO60318 1980 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 USP17L21D6R901 530 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
TUBB3-204ENST00000554116 ADAMTS4O75173 837 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 PGK1P00558 417 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 FCER1AP12319 257 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 IRX5P78411 483 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-204ENST00000554116 SMAD3P84022 425 aaKnown RBP13.95□□□□□ -0.18
TUBB3-204ENST00000554116 C16orf86Q6ZW13 317 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 RIOX2Q8IUF8 465 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 MYLIPQ8WY64 445 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 TINF2Q9BSI4 451 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 ATP8A2Q9NTI2 1148 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 NCOR1O75376 2440 aa13.95□□□□□ -0.18
TUBB3-204ENST00000554116 APBB1O00213 710 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 VWA5AO00534 786 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 KIAA0355O15063 1070 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-204ENST00000554116 FOSL2P15408 326 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 MYO9BQ13459 2157 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 CCSAPQ6IQ19 270 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-204ENST00000554116 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 BOLA2Q9H3K6 86 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 ZBTB40Q9NUA8 1239 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 PAG1Q9NWQ8 432 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 COG6Q9Y2V7 657 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 ROBO3Q96MS0 1386 aa13.94□□□□□ -0.18
TUBB3-204ENST00000554116 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 A0A1W2PQ45 241 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-204ENST00000554116 A0A1W2PQY0 241 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 ADCY6O43306 1168 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 SLC25A27O95847 323 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 ATP5JP18859 108 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-204ENST00000554116 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
TUBB3-204ENST00000554116 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 MMP19Q99542 508 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 HAUS7Q99871 368 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
TUBB3-204ENST00000554116 ARHGEF10LQ9HCE6 1279 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 NRBP1Q9UHY1 535 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 PPP1R9AQ9ULJ8 1098 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 DIS3Q9Y2L1 958 aaKnown RBP13.93□□□□□ -0.18
TUBB3-204ENST00000554116 RIPK3Q9Y572 518 aa13.93□□□□□ -0.18
TUBB3-204ENST00000554116 DNAJC25-GNG10A0A024R161 153 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 MYADML2A6NDP7 307 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 SNAI1O95863 264 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-204ENST00000554116 STAT3P40763 770 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 FAM83BQ5T0W9 1011 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 KLHDC9Q8NEP7 349 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 FGD4Q96M96 766 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-204ENST00000554116 SLC5A4Q9NY91 659 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 TACC3Q9Y6A5 838 aa13.92□□□□□ -0.18
TUBB3-204ENST00000554116 CLTBP09497 229 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms