RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CASP7P55210 303 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 LACTBP83111 547 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 LSM11P83369 360 aaKnown RBP eCLIP2.94□□□□□ -1.946e-6■□□□□ 8.3
PRPF39-205ENST00000554081 SPOUT1Q5T280 376 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 UTP14CQ5TAP6 766 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 HHIPL2Q6UWX4 724 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CERS3Q8IU89 383 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 PDCD7Q8N8D1 485 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 PURBQ96QR8 312 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 UBE2OQ9C0C9 1292 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 BRPF3Q9ULD4 1205 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CCPG1Q9ULG6 757 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 SNCAIPQ9Y6H5 919 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 MUC6Q6W4X9 2439 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 FLT1P17948 1338 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CRYBG1Q9Y4K1 1723 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 ITGB4P16144 1822 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 PIEZO1Q92508 2521 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 KBTBD13C9JR72 458 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 RNF113AO15541 343 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CTNND1O60716 968 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 MYL3P08590 195 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 FCER1AP12319 257 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 EIF2AK2P19525 551 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 MARK3P27448 753 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 BACE1P56817 501 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF280AP59817 542 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CCT2P78371 535 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 BEX3Q00994 111 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 NMIQ13287 307 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 SART3Q15020 963 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 Q7L0L9 218 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 OTOP2Q7RTS6 562 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 FOXP4Q8IVH2 680 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 RASSF8Q8NHQ8 419 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 DIS3LQ8TF46 1054 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 OSBP2Q969R2 916 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CCDC43Q96MW1 224 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 GMLQ99445 158 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 UPF3BQ9BZI7 483 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 DHX36Q9H2U1 1008 aaKnown RBP2.94□□□□□ -1.94
PRPF39-205ENST00000554081 SLC5A4Q9NY91 659 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 IRS2Q9Y4H2 1338 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 WDR87Q6ZQQ6 2873 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 ZFHX2Q9C0A1 2572 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CCDC69A6NI79 296 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 F5H6K3 240 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 H0YGN5 161 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 NOP56O00567 594 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CTSHP09668 335 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ACRP10323 421 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CPA1P15085 419 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 HOXA13P31271 388 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ADCYAP1R1P41586 468 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 FKBP1BP68106 108 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PPATQ06203 517 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 KLRC3Q07444 240 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 COG2Q14746 738 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 IMMTQ16891 758 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 MCTP1Q6DN14 999 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 TTBK2Q6IQ55 1244 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 NECAB2Q7Z6G3 386 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.93□□□□□ -1.946e-6■■■■■ 27.5
PRPF39-205ENST00000554081 MICAL1Q8TDZ2 1067 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 MMP19Q99542 508 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 HTATIP2Q9BUP3 242 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PLA2G12BQ9BX93 195 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 AP5M1Q9H0R1 490 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 VPS33BQ9H267 617 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SH2D4AQ9H788 454 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 GOPCQ9HD26 462 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 DCP1AQ9NPI6 582 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 WDR70Q9NW82 654 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PASKQ96RG2 1323 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CHD4Q14839 1912 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SPDYE5A6NIY4 337 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L15C9J2P7 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L13C9JLJ4 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L11C9JVI0 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L18D6R9N7 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L22D6RA61 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L17D6RBQ6 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L19D6RCP7 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L20D6RJB6 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 STK25O00506 426 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 BACH1O14867 736 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 RAB11FIP3O75154 756 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 IGHDP01880 384 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CT47B1P0C2W7 299 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 VCAM1P19320 739 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 ADORA2AP29274 412 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 RFX5P48382 616 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L24Q0WX57 530 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 NFX1Q12986 1120 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 IFIT1BQ5T764 474 aaKnown RBP2.93□□□□□ -1.94
PRPF39-205ENST00000554081 CXCL17Q6UXB2 119 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 SH3BP5LQ7L8J4 393 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 HEATR3Q7Z4Q2 680 aa2.93□□□□□ -1.94
PRPF39-205ENST00000554081 PLEKHH3Q7Z736 793 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms