RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 ABCC4O15439 1325 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.88□□□□□ -1.31
UBR7-203ENST00000553857 CPNE3O75131 537 aaKnown RBP6.88□□□□□ -1.31
UBR7-203ENST00000553857 GNAI3P08754 354 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 ZNF853P0CG23 659 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 IL13P35225 146 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 ZNF574Q6ZN55 896 aaPredicted RBP6.88□□□□□ -1.31
UBR7-203ENST00000553857 GLIS3Q8NEA6 775 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 NIF3L1Q9GZT8 377 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 GZF1Q9H116 711 aaPredicted RBP6.88□□□□□ -1.31
UBR7-203ENST00000553857 CCDC86Q9H6F5 360 aaKnown RBP6.88□□□□□ -1.31
UBR7-203ENST00000553857 DCTPP1Q9H773 170 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 GRPEL1Q9HAV7 217 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
UBR7-203ENST00000553857 EID1Q9Y6B2 187 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 U3KQE9 123 aa6.88□□□□□ -1.31
UBR7-203ENST00000553857 KIF20BQ96Q89 1820 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 PREX1Q8TCU6 1659 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 AGLP35573 1532 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 CPSF1Q10570 1443 aaKnown RBP6.87□□□□□ -1.31
UBR7-203ENST00000553857 FSD2A1L4K1 749 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 EIF1AYO14602 144 aaKnown RBP6.87□□□□□ -1.31
UBR7-203ENST00000553857 TMPRSS2O15393 492 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 HTATSF1O43719 755 aaKnown RBP6.87□□□□□ -1.31
UBR7-203ENST00000553857 ZNF862O60290 1169 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 HMOX1P09601 288 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 CCDC173Q0VFZ6 552 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 MAP7Q14244 749 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 ANKRD44Q8N8A2 993 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
UBR7-203ENST00000553857 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
UBR7-203ENST00000553857 DDX49Q9Y6V7 483 aaKnown RBP6.87□□□□□ -1.31
UBR7-203ENST00000553857 NLRP1Q9C000 1473 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 TTC21AQ8NDW8 1320 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 ERC2O15083 957 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 EPB41L2O43491 1005 aaKnown RBP6.86□□□□□ -1.31
UBR7-203ENST00000553857 PDIA4P13667 645 aaKnown RBP6.86□□□□□ -1.31
UBR7-203ENST00000553857 CDK5R2Q13319 367 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 TTC22Q5TAA0 569 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 CCDC30Q5VVM6 783 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 CLEC17AQ6ZS10 378 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 SPRED2Q7Z698 418 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 FBXL18Q96ME1 805 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 BABAM1Q9NWV8 329 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 TNNQ9UQP3 1299 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 USTQ9Y2C2 406 aa6.86□□□□□ -1.31
UBR7-203ENST00000553857 IBTKQ9P2D0 1353 aaPredicted RBP6.85□□□□□ -1.31
UBR7-203ENST00000553857 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 NDUFB5O43674 189 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 MBD3O95983 291 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 GNAI2P04899 355 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 YBX3P16989 372 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBR7-203ENST00000553857 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
UBR7-203ENST00000553857 GRM2Q14416 872 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 KLHL40Q2TBA0 621 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 HSP90AB4PQ58FF6 505 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 OGFOD2Q6N063 350 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 PRPF40BQ6NWY9 871 aaKnown RBP6.85□□□□□ -1.31
UBR7-203ENST00000553857 OGFOD3Q6PK18 319 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 TXNDC2Q86VQ3 553 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 BCL7CQ8WUZ0 217 aaPredicted RBP6.85□□□□□ -1.31
UBR7-203ENST00000553857 TNPO1Q92973 898 aaKnown RBP6.85□□□□□ -1.31
UBR7-203ENST00000553857 NAP1L5Q96NT1 182 aaPredicted RBP6.85□□□□□ -1.31
UBR7-203ENST00000553857 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 PCDHGC5Q9Y5F6 944 aa6.85□□□□□ -1.31
UBR7-203ENST00000553857 RICTORQ6R327 1708 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 ELL2O00472 640 aaPredicted RBP6.84□□□□□ -1.31
UBR7-203ENST00000553857 CHL1O00533 1208 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 GADD45BO75293 160 aaPredicted RBP6.84□□□□□ -1.31
UBR7-203ENST00000553857 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.31
UBR7-203ENST00000553857 ITGB5P18084 799 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 ANAPC15P60006 121 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 BNIP3Q12983 259 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 SULT6B1Q6IMI4 303 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 WAPLQ7Z5K2 1190 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 STK35Q8TDR2 534 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 PHACTR3Q96KR7 559 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 ATP6V1DQ9Y5K8 247 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 LRRC7Q96NW7 1537 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 A2ML1A8K2U0 1454 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 CD163L1Q9NR16 1453 aa6.84□□□□□ -1.31
UBR7-203ENST00000553857 YEATS2Q9ULM3 1422 aa6.84□□□□□ -1.32
UBR7-203ENST00000553857 NCOA3Q9Y6Q9 1424 aa6.84□□□□□ -1.32
UBR7-203ENST00000553857 EIF4EBP3O60516 100 aaPredicted RBP6.83□□□□□ -1.32
UBR7-203ENST00000553857 RAB11FIP3O75154 756 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 LETM1O95202 739 aaPredicted RBP6.83□□□□□ -1.32
UBR7-203ENST00000553857 TPM2P07951 284 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 MCM5P33992 734 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
UBR7-203ENST00000553857 AMPHP49418 695 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 PTPN12Q05209 780 aaKnown RBP6.83□□□□□ -1.32
UBR7-203ENST00000553857 AP3B2Q13367 1082 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 NME9Q86XW9 330 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 FAM181AQ8N9Y4 354 aa6.83□□□□□ -1.32
UBR7-203ENST00000553857 GPATCH3Q96I76 525 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms