RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SLC25A27O95847 323 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 CYBAP13498 195 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 CDK8P49336 464 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 LRIT3Q3SXY7 679 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 HAUS7Q99871 368 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 MKNK2Q9HBH9 465 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-210ENST00000553779 DLL1O00548 723 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 SEPT4O43236 478 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 RARBP10826 455 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 COPB2P35606 906 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 SLFNL1Q499Z3 407 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 C12orf60Q5U649 245 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 TRPV1Q8NER1 839 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 KANSL2Q9H9L4 492 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 TMX2Q9Y320 296 aa11.87□□□□□ -0.51
ACTN1-210ENST00000553779 MINDY4BA8MYZ0 360 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 APPP05067 770 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
ACTN1-210ENST00000553779 TDO2P48775 406 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 CNPY2Q9Y2B0 182 aa11.86□□□□□ -0.51
ACTN1-210ENST00000553779 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-210ENST00000553779 COBLO75128 1261 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 PGK2P07205 417 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 STAT3P40763 770 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 TMEM132BQ14DG7 1078 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
ACTN1-210ENST00000553779 TRIM60Q495X7 471 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 KIAA1755Q5JYT7 1200 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 PRAMEF19Q5SWL8 479 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 RNF180Q86T96 592 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
ACTN1-210ENST00000553779 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 FBXO28Q9NVF7 368 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-210ENST00000553779 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 STXBP5LQ9Y2K9 1186 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 MYH6P13533 1939 aa11.84□□□□□ -0.51
ACTN1-210ENST00000553779 VWA5AO00534 786 aa11.83□□□□□ -0.52
ACTN1-210ENST00000553779 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-210ENST00000553779 LRRC41Q15345 812 aa11.83□□□□□ -0.52
ACTN1-210ENST00000553779 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
ACTN1-210ENST00000553779 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
ACTN1-210ENST00000553779 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-210ENST00000553779 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
ACTN1-210ENST00000553779 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
ACTN1-210ENST00000553779 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
ACTN1-210ENST00000553779 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
ACTN1-210ENST00000553779 ZHX1Q9UKY1 873 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-210ENST00000553779 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
ACTN1-210ENST00000553779 ZBED4O75132 1171 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 CHGBP05060 677 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
ACTN1-210ENST00000553779 AKR1A1P14550 325 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 GNAT2P19087 354 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 ZNF444Q8N0Y2 327 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-210ENST00000553779 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 APPBP2Q92624 585 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 BADQ92934 168 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 NACAP1Q9BZK3 213 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
ACTN1-210ENST00000553779 SMIM22K7EJ46 135 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
ACTN1-210ENST00000553779 GPAA1O43292 621 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 PGK1P00558 417 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-210ENST00000553779 CLTBP09497 229 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 RAG1P15918 1043 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 TSHZ3Q63HK5 1081 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 SPC25Q9HBM1 224 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 PDLIM7Q9NR12 457 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 CLIP2Q9UDT6 1046 aa11.81□□□□□ -0.52
ACTN1-210ENST00000553779 ERC2O15083 957 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms