RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 PAK2Q13177 524 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 RRAGAQ7L523 313 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
ARHGEF40-202ENST00000553709 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 MORC3Q14149 939 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 SDR42E1Q8WUS8 393 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 TSC1Q92574 1164 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 RPGRIP1Q96KN7 1286 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 FANCLQ9NW38 375 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 ZNF827Q17R98 1081 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 DPP8Q6V1X1 898 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 PPP2R2CQ9Y2T4 447 aa17.02■□□□□ 0.32
ARHGEF40-202ENST00000553709 STX10O60499 249 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 CYP21A2P08686 494 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 BCAMP50895 628 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 MYCT1Q8N699 235 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 CLIC6Q96NY7 704 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 BIN2Q9UBW5 565 aaPredicted RBP17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 SAR1BQ9Y6B6 198 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 ETF1P62495 437 aaKnown RBP17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 RPS6KA1Q15418 735 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 KLHL7Q8IXQ5 586 aa17.02■□□□□ 0.31
ARHGEF40-202ENST00000553709 CIAO1O76071 339 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 VIMP08670 466 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 C2CD5Q86YS7 1000 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 DESI2Q9BSY9 194 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 TXNDC16Q9P2K2 825 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 EXOC3O60645 756 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 GCNT3O95395 438 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 GYG1P46976 350 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 WHAMMP3Q1A5X7 153 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 IFT74Q96LB3 600 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 MRPL44Q9H9J2 332 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 RUFY4Q6ZNE9 571 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 SYCE1Q8N0S2 351 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 TRIM31Q9BZY9 425 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 CPS1P31327 1500 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 ZNF365Q70YC5 407 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 TMEM87AQ8NBN3 555 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
ARHGEF40-202ENST00000553709 GNA14O95837 355 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 SCG2P13521 617 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 BRD3Q15059 726 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 INF2Q27J81 1249 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 USH1GQ495M9 461 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
ARHGEF40-202ENST00000553709 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-202ENST00000553709 ZNF354CQ86Y25 554 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 MAK16Q9BXY0 300 aaKnown RBP17■□□□□ 0.31
ARHGEF40-202ENST00000553709 ERCC6LQ2NKX8 1250 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 UIMC1Q96RL1 719 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 SWAP70Q9UH65 585 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 ZNF215Q9UL58 517 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-202ENST00000553709 DKC1O60832 514 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■■■■ 30
ARHGEF40-202ENST00000553709 ZYXQ15942 572 aaKnown RBP17■□□□□ 0.31
ARHGEF40-202ENST00000553709 DAAM2Q86T65 1068 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 PNMA1Q8ND90 353 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 PUS3Q9BZE2 481 aaKnown RBP17■□□□□ 0.31
ARHGEF40-202ENST00000553709 ATP8A2Q9NTI2 1148 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 NCAPD2Q15021 1401 aa17■□□□□ 0.31
ARHGEF40-202ENST00000553709 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 DDAH1O94760 285 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 PDE8BO95263 885 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 DNM2P50570 870 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 PPFIA1Q13136 1202 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 SPATA1Q5VX52 437 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 PEX26Q7Z412 305 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 NSUN7Q8NE18 718 aaKnown RBP16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 KDM3AQ9Y4C1 1321 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 MAEAQ7L5Y9 396 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 PABPN1LA6NDY0 278 aaKnown RBP16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 ADORA1P30542 326 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 PSMD1Q99460 953 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 GREM2Q9H772 168 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 H7C1D1 291 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 BCRP11274 1271 aa16.99■□□□□ 0.31
ARHGEF40-202ENST00000553709 STRN3Q13033 797 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms