RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 A0A087WZG4 1122 aa5.45□□□□□ -1.54
VRK1-202ENST00000553683 PAPLNO95428 1278 aa5.45□□□□□ -1.54
VRK1-202ENST00000553683 AUHQ13825 339 aaKnown RBP5.45□□□□□ -1.54
VRK1-202ENST00000553683 UNC5AQ6ZN44 842 aa5.45□□□□□ -1.54
VRK1-202ENST00000553683 C7orf61Q8IZ16 206 aa5.45□□□□□ -1.54
VRK1-202ENST00000553683 LINC00116Q8NCU8 138 aa5.45□□□□□ -1.54
VRK1-202ENST00000553683 MKRN2Q9H000 416 aaKnown RBP5.45□□□□□ -1.54
VRK1-202ENST00000553683 TMEM59LQ9UK28 342 aa5.45□□□□□ -1.54
VRK1-202ENST00000553683 SHISA3A0PJX4 238 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 RAC2P15153 192 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 LTKP29376 864 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 EGR3Q06889 387 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 DUSP4Q13115 394 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 NR0B2Q15466 257 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 PDZD8Q8NEN9 1154 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 CPLX3Q8WVH0 158 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 ZNF428Q96B54 188 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 GMLQ99445 158 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 PRDM14Q9GZV8 571 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 FAM53CQ9NYF3 392 aa5.44□□□□□ -1.54
VRK1-202ENST00000553683 BMP8BP34820 402 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 TXKP42681 527 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 PCBP3P57721 371 aaKnown RBP5.43□□□□□ -1.54
VRK1-202ENST00000553683 RBM10P98175 930 aaKnown RBP5.43□□□□□ -1.54
VRK1-202ENST00000553683 TEKQ02763 1124 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 CHRNEQ04844 493 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 TTC6Q86TZ1 520 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 SPPL2CQ8IUH8 684 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 CCDC144CPQ8IYA2 1237 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 LILRA2Q8N149 483 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 OXR1Q8N573 874 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 USHBP1Q8N6Y0 703 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 TCTN2Q96GX1 697 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 CHST7Q9NS84 486 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 C19orf73Q9NVV2 129 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 PCDHA11Q9Y5I1 949 aa5.43□□□□□ -1.54
VRK1-202ENST00000553683 A0A1W2PQH9 124 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 FITM1A5D6W6 292 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 HPXP02790 462 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 GSNP06396 782 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 SNX17Q15036 470 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 TNNI3KQ59H18 835 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 CCDC81Q6ZN84 652 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 TMC3Q7Z5M5 1100 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 ANKS4BQ8N8V4 417 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 TINF2Q9BSI4 451 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 PRDM7Q9NQW5 492 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 SLAMF8Q9P0V8 285 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 FHOD1Q9Y613 1164 aa5.42□□□□□ -1.54
VRK1-202ENST00000553683 WASH4PA8MWX3 477 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 C9IYK1 514 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 SHOXO15266 292 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 PRAMEF1O95521 474 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 ZGLP1P0C6A0 271 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 ZNF143P52747 638 aaPredicted RBP5.41□□□□□ -1.54
VRK1-202ENST00000553683 ARID5AQ03989 594 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 TCEAL1Q15170 157 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 ZYXQ15942 572 aaKnown RBP5.41□□□□□ -1.54
VRK1-202ENST00000553683 RUFY4Q6ZNE9 571 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 LINC01599Q8WXQ3 324 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 FAM168AQ92567 244 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 KIRREL1Q96J84 757 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 FBXL21Q9UKT6 434 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 TCFL5Q9UL49 500 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 DIS3Q9Y2L1 958 aaKnown RBP5.41□□□□□ -1.54
VRK1-202ENST00000553683 RNF114Q9Y508 228 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 LTBP3Q9NS15 1303 aa5.41□□□□□ -1.54
VRK1-202ENST00000553683 DNAJC25-GNG10A0A024R161 153 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 SSU72P8A0A1W2PR75 194 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 ZNF205O95201 554 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 GLI1P08151 1106 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 CD247P20963 164 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 KIR2DL1P43626 348 aaPredicted RBP5.4□□□□□ -1.54
VRK1-202ENST00000553683 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.54
VRK1-202ENST00000553683 SLC7A5Q01650 507 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 SNW1Q13573 536 aaKnown RBP5.4□□□□□ -1.54
VRK1-202ENST00000553683 RALGPS1Q5JS13 557 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 AXDND1Q5T1B0 1012 aaPredicted RBP5.4□□□□□ -1.54
VRK1-202ENST00000553683 PPFIBP1Q86W92 1011 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 ZNF512BQ96KM6 892 aaPredicted RBP5.4□□□□□ -1.54
VRK1-202ENST00000553683 ADAMTS10Q9H324 1103 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 GP6Q9HCN6 339 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 WHRNQ9P202 907 aa5.4□□□□□ -1.54
VRK1-202ENST00000553683 CARMIL2Q6F5E8 1435 aa5.4□□□□□ -1.55
VRK1-202ENST00000553683 SSBP05455 408 aaKnown RBP eCLIP5.39□□□□□ -1.55
VRK1-202ENST00000553683 FGRP09769 529 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 NAT2P11245 290 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 ITGA4P13612 1032 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 NOP2P46087 812 aaKnown RBP5.39□□□□□ -1.55
VRK1-202ENST00000553683 ZC3H6P61129 1189 aaKnown RBP5.39□□□□□ -1.55
VRK1-202ENST00000553683 NCAPHQ15003 741 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 KCNMB1Q16558 191 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 GNPTABQ3T906 1256 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 POU5F2Q8N7G0 328 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 MYLIPQ8WY64 445 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 RCC1LQ96I51 464 aaKnown RBP5.39□□□□□ -1.55
VRK1-202ENST00000553683 GBP3Q9H0R5 595 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 GFOD1Q9NXC2 390 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 TNFRSF10DQ9UBN6 386 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms