RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DNAJC2Q99543 621 aaKnown RBP18.98■□□□□ 0.63
ACTN1-209ENST00000553659 MOV10L1Q9BXT6 1211 aaKnown RBP18.98■□□□□ 0.63
ACTN1-209ENST00000553659 MYH7P12883 1935 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 LAMA3Q16787 3333 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 A0A0G2JMZ2 1700 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 DLL1O00548 723 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 ANAPC15P60006 121 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 MDM2Q00987 491 aaPredicted RBP18.97■□□□□ 0.63
ACTN1-209ENST00000553659 TICAM2Q86XR7 235 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 SHCBP1Q8NEM2 672 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 TRPV1Q8NER1 839 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 EVI5LQ96CN4 794 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 TANGO6Q9C0B7 1094 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 SPATC1LQ9H0A9 340 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 SWAP70Q9UH65 585 aa18.97■□□□□ 0.63
ACTN1-209ENST00000553659 DNM1LO00429 736 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 CYBAP13498 195 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 ADORA2AP29274 412 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 OLFML2BQ68BL8 750 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 Q7L0L9 218 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 MB21D1Q8N884 522 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 KIF2CQ99661 725 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 MTMR10Q9NXD2 777 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 SMCHD1A6NHR9 2005 aa18.96■□□□□ 0.63
ACTN1-209ENST00000553659 COL11A1P12107 1806 aaPredicted RBP18.95■□□□□ 0.62
ACTN1-209ENST00000553659 CYP2D6P10635 497 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 ERCC3P19447 782 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 DSG3P32926 999 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 KIAA1755Q5JYT7 1200 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 SIAH1Q8IUQ4 282 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 SLC44A5Q8NCS7 719 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 STXBP5LQ9Y2K9 1186 aa18.95■□□□□ 0.62
ACTN1-209ENST00000553659 ST18O60284 1047 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 ARRDC4Q8NCT1 418 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 DYNLL2Q96FJ2 89 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 LBHD1Q9BQE6 289 aaPredicted RBP18.94■□□□□ 0.62
ACTN1-209ENST00000553659 MROH8Q9H579 483 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 ARMT1Q9H993 441 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 ARHGEF10LQ9HCE6 1279 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 SLC5A4Q9NY91 659 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 TMX2Q9Y320 296 aa18.94■□□□□ 0.62
ACTN1-209ENST00000553659 COL6A3P12111 3177 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 COBLO75128 1261 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 AKR1B1P15121 316 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 ADD2P35612 726 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 ATN1P54259 1190 aaPredicted RBP18.93■□□□□ 0.62
ACTN1-209ENST00000553659 CCDC17Q96LX7 622 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 SH2D4AQ9H788 454 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 RAD50Q92878 1312 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
ACTN1-209ENST00000553659 K7ELQ4 463 aaPredicted RBP18.92■□□□□ 0.62
ACTN1-209ENST00000553659 PRKAB2O43741 272 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 FLOT1O75955 427 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 ATP5JP18859 108 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 MCM2P49736 904 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 ICA1Q05084 483 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 PLS1Q14651 629 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
ACTN1-209ENST00000553659 NCAPG2Q86XI2 1143 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 ABRAQ8N0Z2 381 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.92■□□□□ 0.625e-6■■■■■ 34.6
ACTN1-209ENST00000553659 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 VCPKMTQ9H867 229 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 DIAPH3Q9NSV4 1193 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 PRKAG2Q9UGJ0 569 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 CIZ1Q9ULV3 898 aaPredicted RBP18.92■□□□□ 0.62
ACTN1-209ENST00000553659 PLXNA1Q9UIW2 1896 aa18.92■□□□□ 0.62
ACTN1-209ENST00000553659 SEPT4O43236 478 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 MBD4O95243 580 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 RTP1P59025 263 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 SLFNL1Q499Z3 407 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 C12orf60Q5U649 245 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 SPICE1Q8N0Z3 855 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 ATG4CQ96DT6 458 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 ANO2Q9NQ90 1003 aa18.91■□□□□ 0.62
ACTN1-209ENST00000553659 KBTBD13C9JR72 458 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 WDR46O15213 610 aaKnown RBP18.9■□□□□ 0.62
ACTN1-209ENST00000553659 SGSM2O43147 1006 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 CDK8P49336 464 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 FAM109BQ6ICB4 259 aaPredicted RBP18.9■□□□□ 0.62
ACTN1-209ENST00000553659 SLC39A5Q6ZMH5 540 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 CLEC10AQ8IUN9 316 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 AMOTL1Q8IY63 956 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 HAUS7Q99871 368 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 CHMP5Q9NZZ3 219 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 ADAMTS5Q9UNA0 930 aa18.9■□□□□ 0.62
ACTN1-209ENST00000553659 USP17L12C9JPN9 530 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 USP17L21D6R901 530 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 SLC25A27O95847 323 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 FCER1AP12319 257 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 UBE3CQ15386 1083 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 PRAMEF19Q5SWL8 479 aa18.89■□□□□ 0.61
ACTN1-209ENST00000553659 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms