RNA–Protein interactions for RNA: ENST00000553521.5

SRSF5-203, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 2,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-203ENST00000553521 KANSL2Q9H9L4 492 aa17.42■□□□□ 0.38
SRSF5-203ENST00000553521 BARHL2Q9NY43 387 aa17.42■□□□□ 0.38
SRSF5-203ENST00000553521 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 GREB1LQ9C091 1923 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-203ENST00000553521 TRIM75PA6NK02 468 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 USP17L5A8MUK1 530 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 GOLGA8HP0CJ92 632 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 TRAPPC10P48553 1259 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 KRI1Q8N9T8 703 aaKnown RBP17.41■□□□□ 0.38
SRSF5-203ENST00000553521 ZNF70Q9UC06 446 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-203ENST00000553521 ZBTB12Q9Y330 459 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-203ENST00000553521 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 FAM237AA0A1B0GTK4 181 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 TNIP1Q15025 636 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-203ENST00000553521 FAM151AQ8WW52 585 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 MKL1Q969V6 931 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 NYAP2Q9P242 653 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 SIPA1L1O43166 1804 aa17.41■□□□□ 0.38
SRSF5-203ENST00000553521 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
SRSF5-203ENST00000553521 NDUFA8P51970 172 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 BLIDQ8IZY5 108 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 HERC5Q9UII4 1024 aaKnown RBP17.4■□□□□ 0.38
SRSF5-203ENST00000553521 PCDHB6Q9Y5E3 794 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 NFKBIEO00221 500 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 PTPREP23469 700 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 SASS6Q6UVJ0 657 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 TMEM179Q6ZVK1 233 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 LRRC47Q8N1G4 583 aaKnown RBP17.4■□□□□ 0.38
SRSF5-203ENST00000553521 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
SRSF5-203ENST00000553521 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
SRSF5-203ENST00000553521 SEC63Q9UGP8 760 aaKnown RBP17.4■□□□□ 0.38
SRSF5-203ENST00000553521 PTGER2P43116 358 aa17.39■□□□□ 0.38
SRSF5-203ENST00000553521 TYRO3Q06418 890 aa17.39■□□□□ 0.38
SRSF5-203ENST00000553521 GPATCH4Q5T3I0 446 aaKnown RBP17.39■□□□□ 0.38
SRSF5-203ENST00000553521 WWC2Q6AWC2 1192 aa17.39■□□□□ 0.38
SRSF5-203ENST00000553521 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.38
SRSF5-203ENST00000553521 STXBP3O00186 592 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
SRSF5-203ENST00000553521 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 ZNF579Q8NAF0 562 aaKnown RBP17.39■□□□□ 0.37
SRSF5-203ENST00000553521 GPKOWQ92917 476 aaPredicted RBP eCLIP17.39■□□□□ 0.376e-13■■□□□ 11.8
SRSF5-203ENST00000553521 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 PFKFB1P16118 471 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 HPSEQ9Y251 543 aa17.39■□□□□ 0.37
SRSF5-203ENST00000553521 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
SRSF5-203ENST00000553521 MYO1BO43795 1136 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 CAVIN2O95810 425 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
SRSF5-203ENST00000553521 SHC4Q6S5L8 630 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 PPP1R9BQ96SB3 815 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 SDF4Q9BRK5 362 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 FBXO2Q9UK22 296 aaPredicted RBP17.38■□□□□ 0.37
SRSF5-203ENST00000553521 BAZ2BQ9UIF8 2168 aaKnown RBP17.38■□□□□ 0.37
SRSF5-203ENST00000553521 TCP10L2B9ZVM9 353 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 ZNF202O95125 648 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
SRSF5-203ENST00000553521 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 FAM83AQ86UY5 434 aa17.38■□□□□ 0.37
SRSF5-203ENST00000553521 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
SRSF5-203ENST00000553521 CLRN2A0PK11 232 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 FAM196BA6NMK8 535 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 TTC38Q5R3I4 469 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 CLEC10AQ8IUN9 316 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 ZMYND12Q9H0C1 365 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 ATP2B1P20020 1258 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 SYKP43405 635 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
SRSF5-203ENST00000553521 TYW1BQ6NUM6 668 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 MRVI1Q9Y6F6 885 aa17.37■□□□□ 0.37
SRSF5-203ENST00000553521 FRMPD2Q68DX3 1309 aaPredicted RBP17.36■□□□□ 0.37
SRSF5-203ENST00000553521 M0R2N6 131 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 SLURP2P0DP57 97 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
SRSF5-203ENST00000553521 GNA11P29992 359 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 PIK3AP1Q6ZUJ8 805 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 DCAF4Q8WV16 495 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 CLIC6Q96NY7 704 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 SYNPO2Q9UMS6 1093 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 NAPAP54920 295 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 PIGSQ96S52 555 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 CPVLQ9H3G5 476 aa17.36■□□□□ 0.37
SRSF5-203ENST00000553521 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.377e-75■■■■■ 34.3
SRSF5-203ENST00000553521 VAT1LQ9HCJ6 419 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms