RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SCYL3Q8IZE3 742 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 WDR66Q8TBY9 1149 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 DIS3LQ8TF46 1054 aaKnown RBP9.12□□□□□ -0.95
ATXN3-219ENST00000553488 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-219ENST00000553488 SLC45A1Q9Y2W3 748 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 NDUFB9Q9Y6M9 179 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 SALL1Q9NSC2 1324 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 FOCADQ5VW36 1801 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 IFIT1P09914 478 aaKnown RBP9.11□□□□□ -0.95
ATXN3-219ENST00000553488 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
ATXN3-219ENST00000553488 PTPRAP18433 802 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
ATXN3-219ENST00000553488 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-219ENST00000553488 DEFB118Q96PH6 123 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 GDF15Q99988 308 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 STAP2Q9UGK3 403 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 AFG3L2Q9Y4W6 797 aa9.11□□□□□ -0.95
ATXN3-219ENST00000553488 GAKO14976 1311 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 COL2A1P02458 1487 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 EYA2O00167 538 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 TNPO2O14787 897 aaKnown RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 CAPN2P17655 700 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 BMP8BP34820 402 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 RGS3P49796 1198 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 PPP1R26Q5T8A7 1209 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 FASTKD5Q7L8L6 764 aaKnown RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 ATG9AQ7Z3C6 839 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 LPIN2Q92539 896 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 PAWRQ96IZ0 340 aaKnown RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 IDI2Q9BXS1 227 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-219ENST00000553488 ZHX2Q9Y6X8 837 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 TTC28Q96AY4 2481 aa9.1□□□□□ -0.95
ATXN3-219ENST00000553488 ENTPD3O75355 529 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 SLC5A1P13866 664 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 NR1H3Q13133 447 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 FAM110CQ1W6H9 321 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 GADL1Q6ZQY3 521 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 MEIOBQ8N635 442 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 KIFC2Q96AC6 838 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.09□□□□□ -0.951e-11■■■■□ 25.2
ATXN3-219ENST00000553488 USP44Q9H0E7 712 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
ATXN3-219ENST00000553488 USP40Q9NVE5 1235 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 AGTPBP1Q9UPW5 1226 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 LTBP2Q14767 1821 aa9.09□□□□□ -0.95
ATXN3-219ENST00000553488 ZNF521Q96K83 1311 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 DDTLA6NHG4 134 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-219ENST00000553488 APBB1O00213 710 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 TFRCP02786 760 aaKnown RBP9.08□□□□□ -0.96
ATXN3-219ENST00000553488 LDHBP07195 334 aaKnown RBP9.08□□□□□ -0.96
ATXN3-219ENST00000553488 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 TREML2Q5T2D2 321 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 Q6ZVU0 165 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 NECAB2Q7Z6G3 386 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-219ENST00000553488 ANKRD13CQ8N6S4 541 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 SMCR8Q8TEV9 937 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-219ENST00000553488 ZFP42Q96MM3 310 aa9.08□□□□□ -0.96
ATXN3-219ENST00000553488 MYO5AQ9Y4I1 1855 aaKnown RBP9.08□□□□□ -0.96
ATXN3-219ENST00000553488 PTPRCP08575 1304 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 TRIM75PA6NK02 468 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 HMGCRP04035 888 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-219ENST00000553488 PHKA1P46020 1223 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 MCM6Q14566 821 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 ATP2B3Q16720 1220 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 LRIT3Q3SXY7 679 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-219ENST00000553488 Q7L0L9 218 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 C7orf61Q8IZ16 206 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 MRS2Q9HD23 443 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
ATXN3-219ENST00000553488 ZMYND8Q9ULU4 1186 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-219ENST00000553488 PFASO15067 1338 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 PDS5AQ29RF7 1337 aaKnown RBP9.06□□□□□ -0.96
ATXN3-219ENST00000553488 CTNND1O60716 968 aaKnown RBP9.06□□□□□ -0.96
ATXN3-219ENST00000553488 CIAO1O76071 339 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 MAGEA10P43363 369 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-219ENST00000553488 MAP3K21Q5TCX8 1036 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 DEFB123Q8N688 67 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 ZNF384Q8TF68 577 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 TRIB2Q92519 343 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 COA7Q96BR5 231 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 MTMR10Q9NXD2 777 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 GJD2Q9UKL4 321 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 DENND2AQ9ULE3 1009 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 STXBP5LQ9Y2K9 1186 aa9.06□□□□□ -0.96
ATXN3-219ENST00000553488 LRRFIP2Q9Y608 721 aaKnown RBP9.06□□□□□ -0.96
ATXN3-219ENST00000553488 RLFQ13129 1914 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 FAM196BA6NMK8 535 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 ADORA1P30542 326 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 BTDP43251 543 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 RHBDL3P58872 404 aa9.05□□□□□ -0.96
ATXN3-219ENST00000553488 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
ATXN3-219ENST00000553488 RASGRF1Q13972 1273 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms