RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 FAM207AQ9NSI2 230 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-208ENST00000553289 IVNS1ABPQ9Y6Y0 642 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 TNKSO95271 1327 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 LAD1O00515 517 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 SEMA3EO15041 775 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 DAPK3O43293 454 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 GAS7O60861 476 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 TCP1P17987 556 aaKnown RBP12.74□□□□□ -0.37
SYNE2-208ENST00000553289 CDC25BP30305 580 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
SYNE2-208ENST00000553289 PPP1R21Q6ZMI0 780 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-208ENST00000553289 EFCAB8A8MWE9 144 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 LMNTD2Q8IXW0 634 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
SYNE2-208ENST00000553289 RTEL1Q9NZ71 1219 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 OAS2P29728 719 aaKnown RBP12.74□□□□□ -0.37
SYNE2-208ENST00000553289 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
SYNE2-208ENST00000553289 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 USH1GQ495M9 461 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 GRK7Q8WTQ7 553 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 RNF34Q969K3 372 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 TBC1D7Q9P0N9 293 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
SYNE2-208ENST00000553289 PPP6R2O75170 966 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 ETF1P62495 437 aaKnown RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 SRGAP1Q7Z6B7 1085 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 TRIM31Q9BZY9 425 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PALD1Q9ULE6 856 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 HOXA7P31268 230 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 RASA3Q14644 834 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PCDHA7Q9UN72 937 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PPP2R2CQ9Y2T4 447 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 ATP10DQ9P241 1426 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 I3L4J1 428 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 FGAP02671 866 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 GNPTABQ3T906 1256 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 CEP85LQ5SZL2 805 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 VSIG1Q86XK7 387 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 C17orf53Q8N3J3 647 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 FBXO18Q8NFZ0 1043 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 CRCPO75575 148 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 ADKP55263 362 aaKnown RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 TNFAIP1Q13829 316 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 TBC1D31Q96DN5 1066 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PSTPIP2Q9H939 334 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 PCDHA12Q9UN75 941 aa12.73□□□□□ -0.37
SYNE2-208ENST00000553289 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
SYNE2-208ENST00000553289 HSPA1LP34931 641 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 LRRC8AQ8IWT6 810 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 GOLGA8KD6RF30 607 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 HSPA2P54652 639 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 SPATS2Q86XZ4 545 aaKnown RBP12.72□□□□□ -0.37
SYNE2-208ENST00000553289 GSDMAQ96QA5 445 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-208ENST00000553289 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 NLRC4Q9NPP4 1024 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 DDX39AO00148 427 aaKnown RBP12.72□□□□□ -0.37
SYNE2-208ENST00000553289 APBA1Q02410 837 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 KRT71Q3SY84 523 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 ZMYM1Q5SVZ6 1142 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 STAMQ92783 540 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 MCUR1Q96AQ8 359 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 FOSP01100 380 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-208ENST00000553289 KRT26Q7Z3Y9 468 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
SYNE2-208ENST00000553289 CD19P15391 556 aa12.71□□□□□ -0.37
SYNE2-208ENST00000553289 TSNAXIP1Q2TAA8 658 aa12.71□□□□□ -0.37
SYNE2-208ENST00000553289 GKAP1Q5VSY0 366 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-208ENST00000553289 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.37
SYNE2-208ENST00000553289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms