RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
PRKCH-204ENST00000553265 AOC2O75106 756 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 ALX3O95076 343 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 ATF4P18848 351 aaPredicted RBP8.65□□□□□ -1.02
PRKCH-204ENST00000553265 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.02
PRKCH-204ENST00000553265 MPP2Q14168 576 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 CCDC81Q6ZN84 652 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.65□□□□□ -1.02
PRKCH-204ENST00000553265 REC114Q7Z4M0 266 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 CCDC84Q86UT8 332 aaPredicted RBP8.65□□□□□ -1.02
PRKCH-204ENST00000553265 DCAF11Q8TEB1 546 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 BRMS1Q9HCU9 246 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 RAD18Q9NS91 495 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 CAMTA1Q9Y6Y1 1673 aa8.65□□□□□ -1.03
PRKCH-204ENST00000553265 SSH2Q76I76 1423 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 MCM4P33991 863 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 KIF4BQ2VIQ3 1234 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 IGF2-ASQ6U949 168 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 MCF2L2Q86YR7 1114 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 ELMO3Q96BJ8 720 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.64□□□□□ -1.03
PRKCH-204ENST00000553265 LRRC3Q9BY71 257 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 TMPRSS13Q9BYE2 586 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
PRKCH-204ENST00000553265 POGKQ9P215 609 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 AP4E1Q9UPM8 1137 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 PCDHGC5Q9Y5F6 944 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
PRKCH-204ENST00000553265 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 SPATA31A1Q5TZJ5 1347 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 PRAMEF27A3QJZ7 478 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 FGRP09769 529 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 SPATA31C1P0DKV0 1188 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 CWF19L2Q2TBE0 894 aaKnown RBP8.63□□□□□ -1.03
PRKCH-204ENST00000553265 EXOSC6Q5RKV6 272 aaKnown RBP8.63□□□□□ -1.03
PRKCH-204ENST00000553265 HP1BP3Q5SSJ5 553 aaPredicted RBP8.63□□□□□ -1.03
PRKCH-204ENST00000553265 C12orf40Q86WS4 652 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 SCARF2Q96GP6 870 aaPredicted RBP8.63□□□□□ -1.03
PRKCH-204ENST00000553265 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 PPT2Q9UMR5 302 aa8.63□□□□□ -1.03
PRKCH-204ENST00000553265 POLR3KQ9Y2Y1 108 aaPredicted RBP8.63□□□□□ -1.03
PRKCH-204ENST00000553265 USP19O94966 1318 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 SBF2Q86WG5 1849 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 TMPRSS2O15393 492 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 DRD2P14416 443 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 SF3A1Q15459 793 aaKnown RBP8.62□□□□□ -1.03
PRKCH-204ENST00000553265 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 SCARA3Q6AZY7 606 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 GK5Q6ZS86 529 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 SLITRK4Q8IW52 837 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 DHX38Q92620 1227 aaKnown RBP8.62□□□□□ -1.03
PRKCH-204ENST00000553265 DRC1Q96MC2 740 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 PRDM11Q9NQV5 511 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 PPP1R9AQ9ULJ8 1098 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 CORINQ9Y5Q5 1042 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 SLIT3O75094 1523 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 CASZ1Q86V15 1759 aa8.62□□□□□ -1.03
PRKCH-204ENST00000553265 COL5A2P05997 1499 aaPredicted RBP8.62□□□□□ -1.03
PRKCH-204ENST00000553265 CPDO75976 1380 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 COL18A1P39060 1754 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
PRKCH-204ENST00000553265 ADH5P11766 374 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 PPM1JQ5JR12 505 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 GMLQ99445 158 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
PRKCH-204ENST00000553265 GTF2F1P35269 517 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRKCH-204ENST00000553265 SOX9P48436 509 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 HNRNPUQ00839 825 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRKCH-204ENST00000553265 ID3Q02535 119 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 CLCQ05315 142 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 CHRNA2Q15822 529 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 ZC3H12AQ5D1E8 599 aaKnown RBP8.6□□□□□ -1.03
PRKCH-204ENST00000553265 FBXW10Q5XX13 1052 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 DIEXFQ68CQ4 756 aaKnown RBP8.6□□□□□ -1.03
PRKCH-204ENST00000553265 HDXQ7Z353 690 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 HIF3AQ9Y2N7 669 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 PCDHB14Q9Y5E9 798 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 MRVI1Q9Y6F6 885 aa8.6□□□□□ -1.03
PRKCH-204ENST00000553265 AKAP12Q02952 1782 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 GFRA2O00451 464 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 APBA3O96018 575 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKCH-204ENST00000553265 SLFN14P0C7P3 912 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 ATP2B1P20020 1258 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 R3HDM1Q15032 1099 aaKnown RBP8.59□□□□□ -1.03
PRKCH-204ENST00000553265 EZH2Q15910 746 aaKnown RBP8.59□□□□□ -1.03
PRKCH-204ENST00000553265 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
PRKCH-204ENST00000553265 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 CAMKK2Q96RR4 588 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 AKTIPQ9H8T0 292 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 CYP4F12Q9HCS2 524 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 PICK1Q9NRD5 415 aa8.59□□□□□ -1.03
PRKCH-204ENST00000553265 GLB1P16278 677 aa8.58□□□□□ -1.04
PRKCH-204ENST00000553265 DYMQ7RTS9 669 aa8.58□□□□□ -1.04
PRKCH-204ENST00000553265 C12orf50Q8NA57 414 aaPredicted RBP8.58□□□□□ -1.04
PRKCH-204ENST00000553265 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms